Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02093 ATGGCTGTCACAAGACTTCTTATTAATGGAAACTTCCACAAGGCCTTTGACAATATTGCATCTCTTGATGTATGGAAATTTGTGAAAAACCGAGACTCCGTGCTAGAAATGCTGAAGGACAAAATCAAGGAGGAGGCACTTAGGACATACCTAATTACCTTCTCTTTATCATATGAATCTTTGAGCATGGATCAGCTCGCAAAAAATTTCGACGTCTCTTTTTCCCGTGTTCAAAGAATTGTCAATAAGAGTGTGATGAATGGCGAGCTTCATGCTAGATTGGATCAACCATCTGGATGCATTGTATTCCGAAATGTTGAACACTCAAGGGTGCAGGCCTTGGCGTTCGAGTTGACTGAGAAATTATCTATCCTTGCAGAGAGTAATGAAAGAGCTACAGAAGCAAGGTTAGGCGGTGGTCGGTTCGATTGCAATACCGCTGCTTCAGGTGGCAGGCGTCAAGAAATGTCCTATTCTCAAAGGCTTACGATACTTGGTGCTTAA 504 0.4246 MAVTRLLINGNFHKAFDNIASLDVWKFVKNRDSVLEMLKDKIKEEALRTYLITFSLSYESLSMDQLAKNFDVSFSRVQRIVNKSVMNGELHARLDQPSGCIVFRNVEHSRVQALAFELTEKLSILAESNERATEARLGGGRFDCNTAASGGRRQEMSYSQRLTILGA 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02093 167 Gene3D - 36 113 IPR036388 -
Mepo6g02093 167 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 37 125 IPR000717 -
Mepo6g02093 167 SUPERFAMILY "Winged helix" DNA-binding domain 32 107 IPR036390 -
Mepo6g02093 167 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 146 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Mepo6g02093 167 ProSiteProfiles PCI domain profile. 1 108 IPR000717 -
Mepo6g02093 167 Pfam PCI domain 3 104 IPR000717 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02093 1 146 Eukaryotic Initiation Factors Gene Family AT3G56150 65.068 4.54e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02093 K03252 - ccaj:109797232 220.705