Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02078 ATGGATTGTTTGGCTACATCACCTGTTCTTTCTAATAATTTTATTCCTTTTCCTTCGACTAACTCCAAATTGGGAGCCGGTTTCCACAGAATATACACAAGTACAACCAAACAAAAATTACGTCTCTCTTTTTCTAGGGAGAATTGTGAAGGTCGGAGTAATGTTGCAATCAAATCAAGCAGAGGACCATCTTCTTTGCAAACCCAACAAGAACATGGAACCTGGGAAGAACCAGATATTCGTAGTGACGATGAGTATGGTGATGAAGAAGATAAAAGCCTTGGATTTAAAAATGACGGGGAACAGAAAGAGACAGAGACGCAGGACGAGTATGAGAAGCGTATTAAGAAAGAGGTTGAAGGACTTTTAAAACCAGAAGAACTAGAAATACTGCAACAGAATATAACTCCTAATTTGGAAAAAATATCATCTGAAAAATGGAGTCCACTGCACTCTCTTGGCTTATCATTTCAGATTTATAGTATGGACAAGCTTCTTGAAAGTGGTCATGATATTGATTTCGTCAATAGGGAAGGTCTCACTGCACTTCATAAGGCGGTTATAGGTAAAAAAGAAGCTGTTATAAGCCATCTTTTACGGAAAGGTGCAAGTCCTCATGTCCAGGATAAGGATGGAGCTACTCCACTTCATTATGCAGTTCAAGTTGGTGCAAAGCAAACTGTGAAATTATTGATCAAATACGATGTTGATGTCAATGTGGCAGATAATGAAGGTTGGACCCCATTGCATGTTGCCGTTCAAAGCCGGAATAGAGATATAGCGAAAATTTTGTTAGCCAATGGCGCAGATAGGTCGATAGAAAATAAGGACGGGAAAACAGCACTTGATATAAGTATATGTTATGGAAAAGACTTCATGTCTTATGACCTTGCTAGATTAATTAAGGTAGGTCCAGGCAACTGA 924 0.3885 MDCLATSPVLSNNFIPFPSTNSKLGAGFHRIYTSTTKQKLRLSFSRENCEGRSNVAIKSSRGPSSLQTQQEHGTWEEPDIRSDDEYGDEEDKSLGFKNDGEQKETETQDEYEKRIKKEVEGLLKPEELEILQQNITPNLEKISSEKWSPLHSLGLSFQIYSMDKLLESGHDIDFVNREGLTALHKAVIGKKEAVISHLLRKGASPHVQDKDGATPLHYAVQVGAKQTVKLLIKYDVDVNVADNEGWTPLHVAVQSRNRDIAKILLANGADRSIENKDGKTALDISICYGKDFMSYDLARLIKVGPGN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02078 307 MobiDBLite consensus disorder prediction 53 111 - -
Mepo6g02078 307 Pfam Ankyrin repeats (3 copies) 161 242 IPR002110 GO:0005515
Mepo6g02078 307 Pfam Ankyrin repeats (3 copies) 244 293 IPR002110 GO:0005515
Mepo6g02078 307 ProSiteProfiles Ankyrin repeat profile. 178 210 IPR002110 GO:0005515
Mepo6g02078 307 SUPERFAMILY Ankyrin repeat 134 289 IPR036770 -
Mepo6g02078 307 ProSiteProfiles Ankyrin repeat region circular profile. 244 276 - -
Mepo6g02078 307 ProSiteProfiles Ankyrin repeat region circular profile. 178 210 - -
Mepo6g02078 307 Gene3D - 217 302 IPR036770 -
Mepo6g02078 307 MobiDBLite consensus disorder prediction 87 111 - -
Mepo6g02078 307 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 110 298 - -
Mepo6g02078 307 ProSiteProfiles Ankyrin repeat region circular profile. 211 243 - -
Mepo6g02078 307 ProSiteProfiles Ankyrin repeat profile. 211 243 IPR002110 GO:0005515
Mepo6g02078 307 MobiDBLite consensus disorder prediction 53 73 - -
Mepo6g02078 307 Gene3D - 104 216 IPR036770 -
Mepo6g02078 307 ProSiteProfiles Ankyrin repeat profile. 244 276 IPR002110 GO:0005515
Mepo6g02078 307 PRINTS Ankyrin repeat signature 212 227 IPR002110 GO:0005515
Mepo6g02078 307 PRINTS Ankyrin repeat signature 260 274 IPR002110 GO:0005515
Mepo6g02078 307 SMART ANK_2a 244 273 IPR002110 GO:0005515
Mepo6g02078 307 SMART ANK_2a 178 207 IPR002110 GO:0005515
Mepo6g02078 307 SMART ANK_2a 145 174 IPR002110 GO:0005515
Mepo6g02078 307 SMART ANK_2a 211 240 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02078 129 295 Ion Channels AT2G25600 24.623 5.30e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02078 - - lja:Lj0g3v0067589.2 409.838