Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02036 ATGCGGAGCCACATTATGTGTACTGGGTGTAGGAACATCTTGCTTTACCCTAGAGGAGCAAGCAATGTTTGTTGTGGATTGTGCAACACAATTACAGCTGTTCTTCCTCCCGGAATGGAATTGTCACAACTTTATTGTGGAGGTTGTAGAACATTGCTAATGCACGCACGTGGAGCTACTACCGTGAGATGTTCCTGCTGTAACACTATAAATCTTGTACCAGATTCTAATCAAATGAACCATATCCGTTGTGGGAATTGCCGGACAACACTCATGTATCCTCATGGAGCTCCCTCAGTCAAATGTGCAGTTTGTCACTATATTACTAATGTCGATATGACCAATGGAAGGCCGCCAACTCCTGTACGGACACCTAATGAAACAACCAGCTCCGAAACGGTATCTTCTACTGCATCATCAAGACCCCGCTTTGAGAGCCAAACTGTAGTAGTTGAAAATCCTATGTCCGTTGATTCAAGTGGGAAATTGGTAAGCAATGTTGTTGTGGGCGTTACAACAGAGAAGAAATGA 531 0.4388 MRSHIMCTGCRNILLYPRGASNVCCGLCNTITAVLPPGMELSQLYCGGCRTLLMHARGATTVRCSCCNTINLVPDSNQMNHIRCGNCRTTLMYPHGAPSVKCAVCHYITNVDMTNGRPPTPVRTPNETTSSETVSSTASSRPRFESQTVVVENPMSVDSSGKLVSNVVVGVTTEKK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02036 176 PANTHER PROTEIN LSD1 3 175 IPR040319 -
Mepo6g02036 176 MobiDBLite consensus disorder prediction 116 146 - -
Mepo6g02036 176 Pfam LSD1 zinc finger 46 70 IPR005735 -
Mepo6g02036 176 Pfam LSD1 zinc finger 7 31 IPR005735 -
Mepo6g02036 176 Pfam LSD1 zinc finger 84 108 IPR005735 -
Mepo6g02036 176 NCBIfam zinc finger domain, LSD1 subclass 43 73 IPR005735 -
Mepo6g02036 176 NCBIfam zinc finger domain, LSD1 subclass 81 110 IPR005735 -
Mepo6g02036 176 NCBIfam zinc finger domain, LSD1 subclass 4 34 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02036 Mepo-Chr6 24065128 24071418 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Mepo6g02036 zf-LSD1 7.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02036 - - gmx:100776394 280.026