Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02024 ATGTACACGTCTTTCAACGTAGAATTCTGCTACCACAAGGATAGTCCTCTTCGGCACAAGCCTAAAAAGGACAACGCACTTGAGTCTCCTGAAAGTCTTAGAAGTAAAAAGATATCAGCTAGATGGGATCCATCTGAAGCATGTCGGCCTATAATTGATGAAGCACCTGTTTTTCATCCAACTCTTGAAGAGTTTGAAGATACACTGAGTTACATAGCGAAGATACGCCCCCTAGCCGAACCTTATGGCATATGTAGGATTGTCCCTCCAGCTTGTTGGGTTCCACCTTGCCTTCTTAAGGAGAAAGATATTTGGGAAAATGCTGAATTTTCCACCCGTATTCAGCAAATTGATTTACTTCAAAATAGAGAACCTATGAAGAAAAAAAGTAGGGGAAGGAAGCGAAAACGTAGAAGGAACTCCAAATCAGGAACATGTAGGAGAGATTCCAAATCAGCTTCTGAAGCTAATAATGCTTCTGAAGCTGATGAGAAATACGGATTTCAAGCAGGGTCCGATTTCACGTTTAAAGACTTTCAGCAATATGCTAGCTACTTTAAGGAATGCTACTTTGGGTTGAAAGATGCAAATGAAGACGGAAAAGTCAATGATAGTAATCACCAAAACCGAAGGGAGCCCTCCGAGGAGGAAATTGAAGGTGAATACTGGCGGATAGTTGAGCAGCCAACGGATGAAGTTGAGGTGTACTATGGAGCTGACTTGGAAACTGGAGTATTTGGAAGTGGTTTTTCTAAGGCATCATCCATACCTAAGGGTTATCCGGATCAGTATGCACTTTCTGGTTGGAATCTAAATAACTTCCCGCGACTACCAGGTTCTGTACTAAGTTTTGAAGGAAGTGACATCTCAGGAGTACTAGTTCCATGGCTGTATGTTGGCATGTGCTTTTCATCATTTTGTTGGCATGTTGAGGATCATCACCTCTATTCGCTTAATTATCTACACTTTGGTGACTCAAAGATATGGTATGGAGTACCTGGAAGCCATGCTTCTGCTTTAGAAGGTGCAATGAAGAAGCACTTGCCTGATTTGTTCGAGGAAGTACCAAATCTACTCAATGATCTGGTTACTCAGTTATCTCCATCAATTCTTAAAGATGAGGGAGTGCCCGTATATCGCACTGTTCAGCACTCTGGCGAATTTGTCATTACTTTTCCGAGGGGGTACCACTCTGGGTTCAATTGTGGGTTCAACTGTGCAGAAGCAGTGAATGTAGCTCCTGTTGATTGGTTAACGCATGGCCTAAATGCCGTTGAACTTTACAGTTTACAACGCCGTAAGACATCATTGTCACATGACAAGCTTTTATTTGGATCATCGCTGGAAGCTATACGAGCCCTTGCAGAGTTAGCTCTTCATGGAAAGGAAAGTTCAAAAAATTTGAAATGGAGAAGCTACTGTGGGAAAGATGGAGTTCTTACTAAGGCATTTAAGGCAAGGATAAAGATGGAAGAAGAGAGGTTAAACTGTCTTCCAACTCATTTTAAGTCACTGAAGATGGGCAATGACTTTGACTTGCATACAGAACGAGAATGCTTTTCTTGCTTCTATGACTTGTATCTATCTGCTGTAGGTTGTGAGTGCTCTCCTGATAAATATTCTTGCCTTAAGCATGCTAGTTCGTTCTGCTCGTGCGAAATGGACAAAAGATTTGTTCTGCTTCGGTATAATATGAATGAGCTAAACAAATTGCTTGAAGCACTAGAAGGGGATTCACTTGCTCTTGAGTTATGGGAAAGTAAAAACTTCGGAATGGTTTCTGCCGAGGCCAATGAGGTTTGCATGAATAAACAAGAGGTGGATGGAGACAAGGGTCTTGAAGAAACTGGTTGTGCAGGAACCAGGGATTGTTCAAATAGTCATGCTACATCAGAGCTAATGCAGTGCGAATCTCACCTTCTAACTCTTAGTGCGCCGAATGAAAGTATAGATAGCGATAATGACAATATGATAGTCATAGACAAAGATAAGGCGGATATTGCAGATAGCCATAACAAGGGTGATTCAGTACTAGAGGAAAAAGTATGTTGTTCAGAGATAAAAAAGGAACAAGACAACATGGAAATTGTTGTTGACCTATCAACTTCATCTTCTGTTGTGAAGAAAGAAGTTTCATCATGCTCTAGGAATGTTCACAATTCTTGTACATCTGATGGTGGAAAACATGAGGTGCATCTGCAAATGGATTCAGATTCAAGAAAGAAACCCAAAATTGTAGTTGAAAAAGTCATTGATACCACGAGCACGAGTATATCTTTGACACAGGAAAGCTTTCTAATGCAAATTTTTAGTACTTCTGTGAAGCCTATAAGTTTGGGATCTGTTGTTCATGGAAAGCTATGGTGCAATAAGCAAGCAATATATCCAAAAGGATTCAAGAGCCGAGTTAATTTCTTTAGTATCGTCAATCCAACAAGAATCTGTAGTTATGTTTCTGAAGTAATTGATGCTGGACTTCTAGGACCTCTTTTCAAGGTTACAATGGAAGGATGTCCAAGTGTCACTTTCACGGAAACCTCGGCTGATAAGTGTTGGGAATCAGTTCTTAAGAGACTACACGATAAAATCACGGAACAAAGGAGTCTAGGTGAACTTGAACTTCCTTCCTTAGAGCTTCTGAAAAGCATCAACGGTTTTAGAATGTTCGGCTTCCCTCTACCGTCCATTGTTCAGGCCACCGAAGCTCAAGATCCCAGTCATCAGTGTGCAGAGTATTGGAATCACAAAGGTTTCCCTACATCTCCAGGAAGTGTCATCGATAACTGTAAAGTCCTATGCTGTTCAAGTAGCCCTATAGATAATGTAAATACCAAAGTTTTTGGTATTAATTTGACTGATCAGGTGAAAGACAACATAGGAGGAAGTTATTATTCTCTTGAAGAGATGAAATCAATACTACGAAAGGCAAGTCCCGAAGAGCTAAGCTCATTGCGCAAGTTTCTCATCTCTGAAGCACAGTGTTCTGAGTGGAGAATGACATTAACATTATTGATCGATGAGATTCAGAAAGCTTTGAAGATAGGACAAGAATAA 3054 0.4064 MYTSFNVEFCYHKDSPLRHKPKKDNALESPESLRSKKISARWDPSEACRPIIDEAPVFHPTLEEFEDTLSYIAKIRPLAEPYGICRIVPPACWVPPCLLKEKDIWENAEFSTRIQQIDLLQNREPMKKKSRGRKRKRRRNSKSGTCRRDSKSASEANNASEADEKYGFQAGSDFTFKDFQQYASYFKECYFGLKDANEDGKVNDSNHQNRREPSEEEIEGEYWRIVEQPTDEVEVYYGADLETGVFGSGFSKASSIPKGYPDQYALSGWNLNNFPRLPGSVLSFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHFGDSKIWYGVPGSHASALEGAMKKHLPDLFEEVPNLLNDLVTQLSPSILKDEGVPVYRTVQHSGEFVITFPRGYHSGFNCGFNCAEAVNVAPVDWLTHGLNAVELYSLQRRKTSLSHDKLLFGSSLEAIRALAELALHGKESSKNLKWRSYCGKDGVLTKAFKARIKMEEERLNCLPTHFKSLKMGNDFDLHTERECFSCFYDLYLSAVGCECSPDKYSCLKHASSFCSCEMDKRFVLLRYNMNELNKLLEALEGDSLALELWESKNFGMVSAEANEVCMNKQEVDGDKGLEETGCAGTRDCSNSHATSELMQCESHLLTLSAPNESIDSDNDNMIVIDKDKADIADSHNKGDSVLEEKVCCSEIKKEQDNMEIVVDLSTSSSVVKKEVSSCSRNVHNSCTSDGGKHEVHLQMDSDSRKKPKIVVEKVIDTTSTSISLTQESFLMQIFSTSVKPISLGSVVHGKLWCNKQAIYPKGFKSRVNFFSIVNPTRICSYVSEVIDAGLLGPLFKVTMEGCPSVTFTETSADKCWESVLKRLHDKITEQRSLGELELPSLELLKSINGFRMFGFPLPSIVQATEAQDPSHQCAEYWNHKGFPTSPGSVIDNCKVLCCSSSPIDNVNTKVFGINLTDQVKDNIGGSYYSLEEMKSILRKASPEELSSLRKFLISEAQCSEWRMTLTLLIDEIQKALKIGQE 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02024 1017 MobiDBLite consensus disorder prediction 200 220 - -
Mepo6g02024 1017 MobiDBLite consensus disorder prediction 127 144 - -
Mepo6g02024 1017 Pfam jmjN domain 56 89 IPR003349 -
Mepo6g02024 1017 MobiDBLite consensus disorder prediction 121 161 - -
Mepo6g02024 1017 ProSiteProfiles FYR domain FYRC motif profile. 826 916 IPR003889 GO:0005634
Mepo6g02024 1017 SUPERFAMILY Clavaminate synthase-like 228 444 - -
Mepo6g02024 1017 SMART fyrn_3 780 824 IPR003888 GO:0005634
Mepo6g02024 1017 Gene3D - 768 910 - -
Mepo6g02024 1017 FunFam Putative lysine-specific demethylase JMJ16 772 910 - -
Mepo6g02024 1017 Pfam JmjC domain, hydroxylase 296 412 IPR003347 -
Mepo6g02024 1017 SMART cupin_9 263 429 IPR003347 -
Mepo6g02024 1017 Gene3D Cupin 40 413 - -
Mepo6g02024 1017 Pfam C5HC2 zinc finger 519 571 IPR004198 -
Mepo6g02024 1017 ProSiteProfiles JmjN domain profile. 55 96 IPR003349 -
Mepo6g02024 1017 SMART JmjN_1 54 95 IPR003349 -
Mepo6g02024 1017 PANTHER LYSINE-SPECIFIC DEMETHYLASE 50 803 - -
Mepo6g02024 1017 ProSiteProfiles JmjC domain profile. 263 429 IPR003347 -
Mepo6g02024 1017 Pfam F/Y-rich N-terminus 777 821 IPR003888 GO:0005634
Mepo6g02024 1017 ProSiteProfiles FYR domain FYRN motif profile. 766 824 IPR003888 GO:0005634
Mepo6g02024 1017 SMART fyrc_3 830 924 IPR003889 GO:0005634
Mepo6g02024 1017 Pfam F/Y rich C-terminus 828 914 IPR003889 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02024 Mepo-Chr6 23926529 23933682 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02024 63 1009 JUMONJI Transcription Factor Family AT4G20400 46.956 0.0 815
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mepo6g02024 JmjC 5.5e-45 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g02024 K11446 - gmx:100801775 1409.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g02024 6 23926529 23933682 Mepo6g02024 6 23926529 23933682 ECH