Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g02009 ATGATGGATGCTGATTTTGAGGGAAAAAATCATCATTTGTATGGAGCAGTAGTGCCTGAGATGAAGGGTGTTGTTGGAAGGGGAAGTAAGGATTGGGATTTGAATGATTGGAGATGGGATGGTGATCTTTTTACTGCTAAGCAACTGAATTCGGTGCCGACGGATTGTAGGAATCGTCAATTTTTACCCGAAATACGTGAAAATGTTGATGTTTCAAATAATTTGGTTTCTGGTGAAGGAAGTAGAGAGTTGGAGAAGAGAAGGAGGGGTTTTGGTGGTGAAGGGTTGGAGATGAATGATGATTTTGGTTCTCTTAATTTGAATCTTGGGGGTCAAGTTTACCCTATAATGGATGGGGAGGAAAAGAGTGGTAAAAAGACAAAGATTGCGCCTGTGCCTACTTCAAATCGTGCTGTTTGTCAGGTGGAGGATTGTAGGGCGGATCTTAGTAACGCAAAGGACTATCATCGTCGACACAAAGTTTGTGATGTGCATTCTAAGGCTAGTAAGGCACTTGTGGGAGGTGTTATGCAGCGATTCTGTCAACAGTGTAGCAGGTTTCATGTTCTTCAAGAGTTTGATGAAGGGAAGAGAAGTTGTCGTAGGCGTCTTGCAGGCCATAATAAGAGGAGGAGGAAGACACATCCTGATACTGCTGTAGTTAATGGAGGTTCTCCGAATGAAGAAAGAGGCAGTAGCTATCTGTTGATGAGTCTACTAAGGATATTGTCCAATATGCATTCCAACGGCCCAGATCATACGAGAAACTTGGATGGTCTATCTCGTCTGATTGGGAACCTGACAAGTTTAGCTGGTACAATTAACGGTAGAAATATAGCATCCTTATTGGAGGGACCTCAAGAATTTGTAAAAGCCGGGACATCTGGAGCTGCACAGAATGTTCCAAACTCAAATCCGAATGGCGCTGAACCATCAAGACCATTTGATTCTTCTATTGAAATGACGAACGGTCTTATCCGTCAGGACCCTCCAGAATCTAGGTTACAGTGCGCGACAGTTCCTGCCAATCATTTGACACAAAAATGTATACCTTCAAGCAGTGTTGGAGTAAGATGTTTAAAACCTCCTCTGATACCACAGTCCTCAAATTTAGTTCCTTCAAGGGGTAGCCTTCCACCTCGACCAGTTGCCACAGAGACTACAGTTGGAAGAAACAGGTTATGTAATATAGACCTGAATAATGTATATGATGACGGGCAGGACTATGTTGAGAACCCCGAAAATTCTCATCCACCTTTGGCCTTAGGGGTTGAATCCCGTGATCATTCTTCATTAGTACAATATGATTCTCTCAAGTCAAGTCCACCTCAGACGAGTAGAAACTCAGATTCGACTTCTTCTCAATCACCATCCAGTTCTAGCGGAGAAGGCCAGAGTCGAACAGATCGAATTATTTTCAAACTCTTTGGCAAGGATCCTAATGATATCCCCCATGTTCTTCGATCACAGGTCCTTAGCTGGTTATCCAACAGTCCCACCGAGATAGAGAGCTATATAAGACCAGGCTGTATTATTTTAACTATATGTCTCCGCCTAGAAAATGCTGCATGGGATGAGCTATGCTATAATTTGGGGCCCAGCTTGAGAAAGCTTCTTGCTGCATCAAATGATTCTCTTTGGAGAACAGGATGGATATATACCAGAGTGCAGCACTCTGTAGCTATTTTGTATAATGGTCAGCTGGTCTTAGATGTGCCATCGCGTCTTGGAAGCCCACAGAATTGTCAGATTTTGTGCATTAAACCCCTTGCTGTCTCTGCAAATGAAGACGTAAAATTTACTGTGAAAGGGTTAAGCCTTTTCTTGTCTAGTGCAAGGTTGCTGTGCGGACTCGAAGGGAAGTACCTGGTAGAGGACACGTGTTATGATTTGATTGATGGCGCTGATGCAGCCATTGGGCATCCTGAGCTTCAGACTCTCAGCTTTTCTTGTCATATACCAAATATGACTGGAAGAGGGTTTATTGAGGTTGAAGATAATAGTCTCAGCAGCTGTTCCTTTCCATTCATAGTTGCCGATCAAGAAATTTGTTCCGAGATATGTAATTTGGAAACTGTCATTGAGGCGGCAGAGACTGCTGATGACGTCCAGATCAAAGCCAAATTAATGGAAGAAAAGACTCGAGCAATGAATTTCGTACAAGAAATGGGTTGGCTCCTTCATAGAATTCGTATGAAATTCCGGCTAGGGTCAATGGCACCTGTTCAAGATCGTTTCCATTTTAATCGGTATACATGGCTTGTCAGCTTCTCTATGGACCATGATTGGTGTGCTGTGATGAAAAAACTCTTGGACATTATTTTTGAAGGTGAAGTTGATACTGGAGAACATATCTCTGCAGAGTTAGCTTTGTTAAACATGGGTCTTCTACACAAAGCTGTCAAGAGAAATTGTAGGCCTATGGTGGAATTATTGTTAAACTTTGTACCAGTTAAAGCATCAGATGGTGGAGATAGTAAAGAGATGCAAGTCAATAAGGCCCCCGATGGATTCTTGTTTAGACCTGATACTGTTGGGCCTGCTGGGTTGACTCCCCTTCATGTCGCAGCAAGTATGAATGGCTATGAGACTGTATTGGATGCATTAACTGATGATCCGGGAATGGTTGGAATTGAGGCTTGGAAAAGTGCCAAGGACAATACAGGTTTGACACCCAATGACTATGCATCCCTAAGAGGCCACTACTCCTACATTCAACTTGTGCAAAGGAAAACAAGCAAGAACAGCCAAACTCAACATGTGCTTGACATCCCAGGCACCCTTGTAGACGGAAACACGATGAAGCAATCAGATGGACATAAGTCATCAAAAGTATTGAGTTTGCATACAGAGAAGATTGCAACAACAGCAATTCCAAATCATTGTGGGCTCTGCCAGCAAAAGCTGGCATATGGCGGCGTTGGTGGCATGAGGAGGGCACTTGTTTATAGGCCGGCGATGCTGTCAATGGTCGCCATTGCAGCCGTATGTGTCTGTGTAGCTTTACTCTTCAAAAGTTCACCAAGAGTTTCCTATGTATTCCAGCCATTCAGCTGGGAATCATTGGATTATGGTTCAATCTAA 3084 0.4326 MMDADFEGKNHHLYGAVVPEMKGVVGRGSKDWDLNDWRWDGDLFTAKQLNSVPTDCRNRQFLPEIRENVDVSNNLVSGEGSRELEKRRRGFGGEGLEMNDDFGSLNLNLGGQVYPIMDGEEKSGKKTKIAPVPTSNRAVCQVEDCRADLSNAKDYHRRHKVCDVHSKASKALVGGVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDTAVVNGGSPNEERGSSYLLMSLLRILSNMHSNGPDHTRNLDGLSRLIGNLTSLAGTINGRNIASLLEGPQEFVKAGTSGAAQNVPNSNPNGAEPSRPFDSSIEMTNGLIRQDPPESRLQCATVPANHLTQKCIPSSSVGVRCLKPPLIPQSSNLVPSRGSLPPRPVATETTVGRNRLCNIDLNNVYDDGQDYVENPENSHPPLALGVESRDHSSLVQYDSLKSSPPQTSRNSDSTSSQSPSSSSGEGQSRTDRIIFKLFGKDPNDIPHVLRSQVLSWLSNSPTEIESYIRPGCIILTICLRLENAAWDELCYNLGPSLRKLLAASNDSLWRTGWIYTRVQHSVAILYNGQLVLDVPSRLGSPQNCQILCIKPLAVSANEDVKFTVKGLSLFLSSARLLCGLEGKYLVEDTCYDLIDGADAAIGHPELQTLSFSCHIPNMTGRGFIEVEDNSLSSCSFPFIVADQEICSEICNLETVIEAAETADDVQIKAKLMEEKTRAMNFVQEMGWLLHRIRMKFRLGSMAPVQDRFHFNRYTWLVSFSMDHDWCAVMKKLLDIIFEGEVDTGEHISAELALLNMGLLHKAVKRNCRPMVELLLNFVPVKASDGGDSKEMQVNKAPDGFLFRPDTVGPAGLTPLHVAASMNGYETVLDALTDDPGMVGIEAWKSAKDNTGLTPNDYASLRGHYSYIQLVQRKTSKNSQTQHVLDIPGTLVDGNTMKQSDGHKSSKVLSLHTEKIATTAIPNHCGLCQQKLAYGGVGGMRRALVYRPAMLSMVAIAAVCVCVALLFKSSPRVSYVFQPFSWESLDYGSI 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g02009 1027 MobiDBLite consensus disorder prediction 432 466 - -
Mepo6g02009 1027 MobiDBLite consensus disorder prediction 204 229 - -
Mepo6g02009 1027 MobiDBLite consensus disorder prediction 365 385 - -
Mepo6g02009 1027 SUPERFAMILY Ankyrin repeat 792 908 IPR036770 -
Mepo6g02009 1027 Gene3D - 132 201 IPR036893 GO:0003677|GO:0005634
Mepo6g02009 1027 ProSiteProfiles Zinc finger SBP-type profile. 137 214 IPR004333 GO:0003677
Mepo6g02009 1027 FunFam Squamosa promoter-binding-like protein 14 132 201 - -
Mepo6g02009 1027 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 92 844 IPR044817 GO:0003677
Mepo6g02009 1027 Gene3D - 779 925 IPR036770 -
Mepo6g02009 1027 Pfam SBP domain 140 213 IPR004333 GO:0003677
Mepo6g02009 1027 SUPERFAMILY SBT domain 138 219 IPR036893 GO:0003677|GO:0005634
Mepo6g02009 1027 MobiDBLite consensus disorder prediction 296 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g02009 Mepo-Chr6 23727165 23736285 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g02009 23 1026 SBP-box Gene Family AT3G60030 45.919 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mepo6g02009 SBP 8.4e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g02009 6 23727165 23736285 Mepo6g02009 6 23727165 23736285 ECH