Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01987 ATGGTGATCATAAACCAAGCAAGAAGGATTGAAGGAAAAGTAGTGCAATTAGGGAAATACGAATTGGGAAAAACACTTGGTGAAGGAAATTTTGGAAAAGTGAAATTGGCTAGAGATACTGATTGTGGACAATTTTTTGCTGTTAAGATTCTTGAAAAGAATAAGATTGTTGATCTTAATAACACTGATCAGATAAAGAGGGAGATATCAACCTTGAAGCTTCTGAAACATCCTAATGTTGTTAGATTATACGAGGTCTTGGCTAGCAAAACCAAAATTTATATGGTACTTGAGTACGTGAATGGAGGAGAGTTATTTGACAAAATTTCATCCAAAGGTAAACTTACCGAAGCTCATGGTAGGAAGATGTTCCAACAATTGATTGATGGTGTGAGTTACTGCCACAATAAGGGTGTCTTCCACAGGGATCTTAAGTTAGAGAATGTACTTGTGGATGCCAAAGGGAACATAAAGATAACTGATTTTAACCTCAGTGCTTTGCCTCAACATTGTAGGGCAGATGGGTTGCTACATACAACTTGTGGAAGTCCAAATTATGTTGCTCCTGAGATTCTTGCCAATAGAGGCTATGATGGCGCGAAATCGGATATTTGGTCATGCGGTGTTATCTTATATGTAATTCTAACAGGATACCTTCCTTTTGATGACAGAAATCTTGCAGTTCTCTATCAAAAGATTTTCAAAGCAGATGTTCAGATACCAAGATGGCTGTCACCTGGTGCTCAAAACATTATAAAGAAAATTCTTGATCCCAATCCTAAAACCCGAGTAACGATGGATATGATCAAAGAAGATGAATGGTTTAAGGAGGGTTATAATCCTGCAAATCTAGAGGATGAGGAAGAGGAAGAGGATGTATACACTGACGATGATGCTTTTTCCATCCAAGAAGTGTCCCTTGAAGGAGACCAGAGTCCAAAATCACCAGCACTTATCAATGCATTTCAGTTGATAGGGATGTCTTCATGCTTAGACCTCTCTGGATTTTTTGAGCAAGAGGATGTCTCGGAGAGGAAGATAAGATTTACGTCAAACCATTCACTAAAAGATTTGACTGAGAAGATTGAGGACATTGTAATAGAAATGGGATTTAGAGCTCAGAAGAAAAATGGAAAATTGAAAGTGATACAAGAGGATAAAGCTCAAAAAAGTCTAGGAAGCCTCTCAGTGGCAGCAGAGGTTTTTGAAGTTGGTCCATCTTTGTATGTTGTAGAACTAAGGAAGTCTTACGGAGATGCTTCTGTATATAGACAATTATGCAAAAGGTTATCGAACGACTTGGGTATAGCCGAGGCGGCAGAGCTAGTAAGCTCAGAAAGCCTAGACATATGA 1353 0.3851 MVIINQARRIEGKVVQLGKYELGKTLGEGNFGKVKLARDTDCGQFFAVKILEKNKIVDLNNTDQIKREISTLKLLKHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKISSKGKLTEAHGRKMFQQLIDGVSYCHNKGVFHRDLKLENVLVDAKGNIKITDFNLSALPQHCRADGLLHTTCGSPNYVAPEILANRGYDGAKSDIWSCGVILYVILTGYLPFDDRNLAVLYQKIFKADVQIPRWLSPGAQNIIKKILDPNPKTRVTMDMIKEDEWFKEGYNPANLEDEEEEEDVYTDDDAFSIQEVSLEGDQSPKSPALINAFQLIGMSSCLDLSGFFEQEDVSERKIRFTSNHSLKDLTEKIEDIVIEMGFRAQKKNGKLKVIQEDKAQKSLGSLSVAAEVFEVGPSLYVVELRKSYGDASVYRQLCKRLSNDLGIAEAAELVSSESLDI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01987 450 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 419 - -
Mepo6g01987 450 FunFam Non-specific serine/threonine protein kinase 316 438 - -
Mepo6g01987 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Mepo6g01987 450 Gene3D Kinase associated domain 1, KA1 321 437 - -
Mepo6g01987 450 Gene3D Transferase(Phosphotransferase) domain 1 13 320 - -
Mepo6g01987 450 FunFam Non-specific serine/threonine protein kinase 13 316 - -
Mepo6g01987 450 SUPERFAMILY Protein kinase-like (PK-like) 17 287 IPR011009 -
Mepo6g01987 450 CDD CIPK_C 320 431 - -
Mepo6g01987 450 Pfam Protein kinase domain 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01987 450 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Mepo6g01987 450 FunFam Non-specific serine/threonine protein kinase 11 99 - -
Mepo6g01987 450 Pfam NAF domain 316 375 IPR004041 GO:0007165
Mepo6g01987 450 ProSiteProfiles Protein kinase domain profile. 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01987 450 ProSiteProfiles NAF domain profile. 314 338 IPR018451 GO:0007165
Mepo6g01987 450 SMART serkin_6 20 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01987 Mepo-Chr6 23343189 23350146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01987 83 441 CBL-interacting serine-threonine protein kinases AT3G17510 71.866 1.40e-179 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mepo6g01987 Pkinase 3.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01987 K07198 - gmx:100815660 708.753