Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01981 ATGGAAGAAAAAGTTCAAACAATGAAATTGCTGGAAGTTGATGAAAGGCTACCATATGATGATAACAATAAAGATCTACAAAACAAGACCGATGAACCCTCGTCTTTCCATAAGAATACCCCAGGATCTACTCTTTTATTAAGTTTGAGCCTTAATAACACAACACAACCTCCCCATCAAATTCAAGGAAATCCCCAAATCCAAATTGGCAATATACGAGTGAAGCTTGATGAAGCAAAGAAGGAAAATGAAAATTTAAGAGGTATGCTAAATCTGGTCAACGATCGATGCAATGTTCTTCAGAATCGTTTACTTTTGGCTATGCATATGCATCAATCATCTTCATTGCCTCAAAATAATCACAACTTGCTGCTGAAGGGAAATCCACAAGATGCGGAGAAACCAGTGTTGCCTACTCGGCAGTTCTTTGATGAGCCTTCACCTTCAGATTGTAGCAAAAATAATGGATTTGTCATAGTGGAAAACAATGAAAACAACATGGGAAGAAATCTTGCATGTGAATACATTAATGAAGGTGAAATAAATAGCAAAATAGAGGACCAATCATCTGAGGTTGGCTGCAGGAGAGCTAGGGTGTCCATAAGGGCACGATCAGATTTTGCTTTCATGGTTGATGGGTGTCAATGGAGAAAATATGGACAAAAGACAGCCAAGGGCAACCCTTGTCCACGAGCTTACTATCGTTGCAGTATGGGAACTTCATGCCCAGTTCGTAAGCAGGTGCAAAGGTGTTTTAAGGATGAGAGTGTGTTCATCACAACCTATGAAGGAAACCATAATCATCAACTTCCACCAGCAGCAAAACCAATAGCAAACTTAACATCATCAGCACTCAACACATTCCTTCCTACCTCATCAACAAATTTACAACAATATGGCAACAATCTAACAAACACATTCCTCTTCTCTTCACCATTATCTCCACCAAACTCAAATGCTATAGCTACTTTCTCTCCATCTCCAACATGCCCTACAATTACACTTGATTTTACACTCCCTCCAAGTAACTATTTACAATTCAAAAATCATAAACAATCATCATTGCTCCCTTTTCCATTCCAAGGTCATTACCCTCAATCATTTGAGGTGTTTCCAAATATGATAAACAATGAGAGAAAACTTGCTTTGGTTGATGTTGTGAGTGAAGCTCTAGAAAAAGATCCTTCTCTCAAGGAAGCATTATTTTCAGCCATGTCCTCATTCACAAAAGGAGATTCTTCAAATATTAATAACCCAAGCCAATTACCTAGTAAGAGTAGTGGTTAA 1287 0.3831 MEEKVQTMKLLEVDERLPYDDNNKDLQNKTDEPSSFHKNTPGSTLLLSLSLNNTTQPPHQIQGNPQIQIGNIRVKLDEAKKENENLRGMLNLVNDRCNVLQNRLLLAMHMHQSSSLPQNNHNLLLKGNPQDAEKPVLPTRQFFDEPSPSDCSKNNGFVIVENNENNMGRNLACEYINEGEINSKIEDQSSEVGCRRARVSIRARSDFAFMVDGCQWRKYGQKTAKGNPCPRAYYRCSMGTSCPVRKQVQRCFKDESVFITTYEGNHNHQLPPAAKPIANLTSSALNTFLPTSSTNLQQYGNNLTNTFLFSSPLSPPNSNAIATFSPSPTCPTITLDFTLPPSNYLQFKNHKQSSLLPFPFQGHYPQSFEVFPNMINNERKLALVDVVSEALEKDPSLKEALFSAMSSFTKGDSSNINNPSQLPSKSSG 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01981 428 SUPERFAMILY WRKY DNA-binding domain 204 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g01981 428 MobiDBLite consensus disorder prediction 13 32 - -
Mepo6g01981 428 SMART WRKY_cls 210 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g01981 428 Pfam WRKY DNA -binding domain 212 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g01981 428 ProSiteProfiles WRKY domain profile. 205 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo6g01981 428 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 68 418 IPR044810 GO:0003700
Mepo6g01981 428 Coils Coil 69 96 - -
Mepo6g01981 428 MobiDBLite consensus disorder prediction 13 42 - -
Mepo6g01981 428 Gene3D WRKY domain 195 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo6g01981 428 MobiDBLite consensus disorder prediction 408 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01981 Mepo-Chr6 23283665 23287678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01981 70 338 WRKY Transcription Factor Family AT4G04450 38.264 1.42e-54 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo6g01981 WRKY 9.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01981 - - cam:101498660 583.178