Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01971 ATGGATGGTGTTACTGTCAAGCTTGAGCCAGAGCAGTTTACTGTTCTAGAATCTTCTCCTATTGCTGTTGATGGTGCTAGTTCCAACATGGTTGAGGAGTCAATGATGAATTCCTCAGCAAACAAGTCAATGCCAGCATCTGGAGTGAATCCAATGATTTCTAATACAACTCAGCTTACCATCTTCTATAATGGGAATATTTGTATTTATGATGGAATACCTGCAGAAAAGATGCAAGAAATAATGCTCATGGCTGCTGCTGCTGCCAAGTCTAGTGAAACGAAGAAGATTGTGAAACAATCTCCCGCCCCTTCACCTGTTCCTACTAGGCCTTCTTCGCCACATGGAACTGCTGATAATATCGCTTCACCGCAGGCACTTCCCTTTCCTGCAAAGAGTTCTATCTGCAGGCTGCAAGAATTTCCAATAGCACGCAGACATTCACTTCAAATGTTTCTTCAGAAGCGGCGAGACAGGTTGGGTAGTAAAGCTCCTTATCCTTTGTCGCCAAAAACAAAGGTAGCTGACAACATGGAGAACAACTTCGGTGCTGACAATTCGCCAGATTCGGTTTCAATGAAGGAAGCAAAGGAAGAATTTCAGCCAACTATATCTGCATCTTGA 624 0.4343 MDGVTVKLEPEQFTVLESSPIAVDGASSNMVEESMMNSSANKSMPASGVNPMISNTTQLTIFYNGNICIYDGIPAEKMQEIMLMAAAAAKSSETKKIVKQSPAPSPVPTRPSSPHGTADNIASPQALPFPAKSSICRLQEFPIARRHSLQMFLQKRRDRLGSKAPYPLSPKTKVADNMENNFGADNSPDSVSMKEAKEEFQPTISAS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01971 207 MobiDBLite consensus disorder prediction 95 126 - -
Mepo6g01971 207 MobiDBLite consensus disorder prediction 174 188 - -
Mepo6g01971 207 Pfam Jas motif 142 166 IPR018467 -
Mepo6g01971 207 Pfam tify domain 55 86 IPR010399 -
Mepo6g01971 207 ProSiteProfiles Tify domain profile. 52 87 IPR010399 -
Mepo6g01971 207 SMART tify_2 52 87 IPR010399 -
Mepo6g01971 207 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 34 177 IPR040390 -
Mepo6g01971 207 MobiDBLite consensus disorder prediction 159 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01971 Mepo-Chr6 23036978 23040324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01971 58 169 Tify Gene Family AT5G20900 52.632 4.20e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mepo6g01971 tify 1.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01971 K13464 - gmx:100306045 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00571 1 5484000 5486356 Mepo6g01971 6 23036978 23040324 PCT