Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01969 ATGGCTCTTTCTTCAACAAAAGACTTAGTACTATCTCGAACAAAACCAATACCCACTCTCATAACATGCACATTCATTTTAACATTGTTGTTGTCTACTCCAGCACTATGTGCTAGTGCTCCCACTAAAGTAACATCTGAATTTGAGTTTCTTAAGGTTGCTCCATCTGAATTTGTTGGGACAGTGCAAGATGTAGTTGGCATTTTGCAAGAAGTAATGTCCATTCTTTCTCAATTTGGTGGTGCTGGATTTGGAGATTCACGCCTCTCTAATGCTGTTTCTGATTGTATTGATATGCTTGATCTTTCCTCTGATGCACTTACTTGGTCTGCCTCTGCTGCTCAAAACCCCAAAGGTAAGCATAATAGTACTGGAAATGTGAACTCTGATGTGAGAACATGGTTAAGTTCTGCACTTGCAAATCCGGAGACATGCATGGACGGATTTGAAGGTACAAGTGGCATTGAGAGTCAATTAGTGTCTACTGGCCTAAGCCAAATGATGTCGATGTTGGCAGAGCTTCTCACACAAGTAGACCCTAATTTAGATAGCTTCACACAAAAAGAACAGAAAGGTCGATTTCCTTCTTGGGTTAAAAGAGATGATAGAAAACTCTTGCAAGCAAATGGAGTGAATGTCGATGTTGTCGTTGCTACCGATGGGAGCGGGAATTTTACCAAGGTGATGGATGCGGTGCATGCAGCTCCCGATTATAGCATGAAACGCTATGTGATATACGTAAAGAAAGGTGTTTATATTGAAAATGTTGAGATCAAGAAGAAGAAATGGAATCTCATGATGGTCGGAGATGGTATGAATTCCACAATTATCACTGGTAATCGGAGCTTCATCGGCGGTTGGACCACATTTAGGTCAGCTACCTTTGCTGTTAGTGGTAGAGGATTCATAGCACGAGACATCTCTTTTCAGAACACTGCTGGTCCTGAGAAGCACCAAGCAGTGGCACTAAGATCCGACTCTGACCTCTCTGTATTCTATCGATGTGGAATTTTTGGTTACCAAGACAGCTTATACACGCATACAATGCGCCAATTCTTCAGAGAATGCAAAATAAGTGGCACTGTCGATTTTATTTTTGGCGATGCGACGACTCTTTTTCAAAACTGTCAAATACTAGTAAAAAAAGGGTTACCGAATCAAAAGAACACTATCACAGCTCACGGACGAAAAGACCCTAACGAACCAACTGGTTTCTCAATCCAATTCTGCAACATTACAGCTGATTCAGACCTTCTTCCTTCGGTTAATTCCACTTATACATATCTTGGAAGACCGTGGAAAGAATATTCAAGAACAATTTTCATGCAATCTCATATAAGTGATGTGTTGAGGCCAGAAGGGTGGCTAGAGTGGAATGGAGATTTTGCATTGGATACATTGTACTATGCTGAGTACATGAATTATGGGTCTGGAGCTGGATTAAATAAACGAGTTAAATGGCCAGGGTATCACATAATGAATGATTCTAGTCAAGCTAGTAACTTCACAGTGACCCAATTTATTGAGGGGAATCTATGGTTGCCCACAACAGGTGTAGCATTCACTGCTGGACTAGGAGTTTAA 1584 0.4104 MALSSTKDLVLSRTKPIPTLITCTFILTLLLSTPALCASAPTKVTSEFEFLKVAPSEFVGTVQDVVGILQEVMSILSQFGGAGFGDSRLSNAVSDCIDMLDLSSDALTWSASAAQNPKGKHNSTGNVNSDVRTWLSSALANPETCMDGFEGTSGIESQLVSTGLSQMMSMLAELLTQVDPNLDSFTQKEQKGRFPSWVKRDDRKLLQANGVNVDVVVATDGSGNFTKVMDAVHAAPDYSMKRYVIYVKKGVYIENVEIKKKKWNLMMVGDGMNSTIITGNRSFIGGWTTFRSATFAVSGRGFIARDISFQNTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDSLYTHTMRQFFRECKISGTVDFIFGDATTLFQNCQILVKKGLPNQKNTITAHGRKDPNEPTGFSIQFCNITADSDLLPSVNSTYTYLGRPWKEYSRTIFMQSHISDVLRPEGWLEWNGDFALDTLYYAEYMNYGSGAGLNKRVKWPGYHIMNDSSQASNFTVTQFIEGNLWLPTTGVAFTAGLGV 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01969 527 SMART PMEI_2 26 177 IPR006501 GO:0004857
Mepo6g01969 527 CDD PMEI-like_4 22 178 - -
Mepo6g01969 527 Gene3D - 212 527 IPR012334 -
Mepo6g01969 527 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 178 IPR035513 -
Mepo6g01969 527 SUPERFAMILY Pectin lyase-like 211 524 IPR011050 -
Mepo6g01969 527 ProSitePatterns Pectinesterase signature 2. 358 367 IPR033131 -
Mepo6g01969 527 Pfam Pectinesterase 214 511 IPR000070 GO:0030599|GO:0042545
Mepo6g01969 527 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 161 IPR035513 -
Mepo6g01969 527 FunFam Pectinesterase 208 525 - -
Mepo6g01969 527 PANTHER PECTINESTERASE 68 516 - -
Mepo6g01969 527 Pfam Plant invertase/pectin methylesterase inhibitor 86 169 IPR006501 GO:0004857
Mepo6g01969 527 NCBIfam pectinesterase inhibitor domain 86 171 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01969 Mepo-Chr6 23005881 23011395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01969 26 525 Carbohydrate Esterase AT3G43270 62.016 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01969 K01051 - gmx:100777500 806.208