Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01968 ATGACAACAAGGAGTCTAAACGTATCACCTTTTGAGGTTGCACTATCCTTGAGACAAGTAGAGGATGTGTTGCATGAAGTGATACATATTTTGGAAATTGAACTTAACATTGCTAATAGTTCTGACCACTCACATCTCTCAAATGCCATATCGACGTACTCAAACTTGCTAGGCATGTCACTTGAAGAAGTCGTTTGGTGTATATCTGCCCTTAAGAGTACAAAAGAAAAATATAATAACACAGGTAACCTAAGTTCAGACATAAGAGCTAGGTTAAGCGCGATTCATGCGAATACAGATACATGCATGGATCAATTTGAAGGAACGGATGAAAAAATGAAAGACAAATTTGCCACAAAGATTGATAGTGTTGATTCCTTAGTGTACAATCTCCTAACTAAAGTTGAGCATACCATGTCAGATGATTATGTCAACTGTGGTCAATATCCTTCTTGGTTTAGCCTGAGCGAACAACAACTGTTGCAGCCATATGCAGAACGGACATTCGATGTTGTAGTCGCTGCCGACCATACCAGAAATTTCTCAAATATTATGGATGTCGTTAATGCTGCACCCGACTCTACCATGAATAGGCACATCGTATTCATCAAGAAGGGTGTATACCACGAAAATGTTCAAGTCCTTAAGAAGAACATTGTCATGATAGGAGACGGAATGGATGCTACGATAATAACCGGTAATCTAAGCAACGCCACAAGCAATTTGAGCACAATCAACACTGCAACCTTCGCTATCATGGGTGTAGGATTCATCGCAAGAGATATTTTGTTCATCAACATTGCTGGACCTTTAGGTTACCAAGCTGTTGCCCTTAGATCGAGTTCTGACCATAGTAACATAATTTGTTGCCTCTAA 876 0.3961 MTTRSLNVSPFEVALSLRQVEDVLHEVIHILEIELNIANSSDHSHLSNAISTYSNLLGMSLEEVVWCISALKSTKEKYNNTGNLSSDIRARLSAIHANTDTCMDQFEGTDEKMKDKFATKIDSVDSLVYNLLTKVEHTMSDDYVNCGQYPSWFSLSEQQLLQPYAERTFDVVVAADHTRNFSNIMDVVNAAPDSTMNRHIVFIKKGVYHENVQVLKKNIVMIGDGMDATIITGNLSNATSNLSTINTATFAIMGVGFIARDILFINIAGPLGYQAVALRSSSDHSNIICCL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01968 291 Pfam Pectinesterase 170 290 IPR000070 GO:0030599|GO:0042545
Mepo6g01968 291 SUPERFAMILY Pectin lyase-like 169 290 IPR011050 -
Mepo6g01968 291 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 132 IPR035513 -
Mepo6g01968 291 Pfam Plant invertase/pectin methylesterase inhibitor 44 132 IPR006501 GO:0004857
Mepo6g01968 291 Gene3D Invertase/pectin methylesterase inhibitor family protein 8 137 IPR035513 -
Mepo6g01968 291 Gene3D - 165 290 IPR012334 -
Mepo6g01968 291 PANTHER PECTINESTERASE 20 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01968 Mepo-Chr6 22991800 22993581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01968 6 290 Carbohydrate Esterase AT3G43270 41.000 5.10e-64 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01968 K01051 - gmx:100777500 235.343