Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01964 ATGGCGTTCGAAGATTTTGATCTTGTATCAGAAAGGCGAAAAGCCAATGCGAAACAACACCTTAAGAAAAAGATTTTGATCGGTGTAACTTCTGCTGTTCTCATAGCATGTGTTATAGCCGCTGTAACATTTGTTATTGTCAAAAGATCAGGACCAGATCATAATAACAATAGGAAACCAGTTCAAAACGCAACGCCAGAACCCGAGCGTGTTGATAAATACTCGAGGCTTGTGAAAATGTTGTGCAGCCACTCAGAGTACAAGGAAAAATGTGTAACCACACTTAAAGAGGCATTGAAAAAAGACCCTAAGTTGAAAGAACCAAAGGATCTTCTAATGGTTTCCATGCTAGTTGCCAAGAATGAAATTAACAAGGCATTCAATAAAACTGCGAACTTGAAATTCGCTTCCAAGGAAGAAAAGGGAGCTTATGAAGATTGTAAACAGTTGTTTGAGGATGCTAAAGAAGAAATGGGATTCTCAATCACTGAAGTTGGTCAACTTGATATTAGCAAACTATCTTCAAAAGAAGCTGAGTTGAACAACTGGCTTAGTGCTGTTATATCTTACCAACAAACTTGCTCTGATGGTTTCCCCGAAGGAGAATTGAAGAAAAAGATGGAGAAGATATTTGCCGAATCAAGGCAACTTGTGAGCAACTCCCTCGCTGTTGTTTCACAAGTTTCTCAAATTGTTAATGCATTTGAAGGCGGACTTTCAGGATTCAAATTACCTTGGGGTAAAACAGATGCACATGCTCCCGCTCCTGATGCTGATGCTGATGCTGTTGCCGATGATGATGAGGATCTTGCTGATGCTCCTGATGGTGCTCCCGGTGCTGATCAGCCGATTTTTGAGGCTCCCATCGGTGCTCCTGGTGCTGCACCCATTGGTGCTCCCCGTGCTGCTGCTCCTCCATCTTGGGCTGCCCCAGCCGTTGACTTGCCTGGATCAACTGAGAAACCTACACCTAATGTCACTGTTGCTCAAGATGGTAGTGGAGATTTCAAAACCATCTCTGAAGCTTTGGCTGCTATTCCACAAACCTACAAAGGAAGGTATGTTGTTTATGTTAAGGAAGGAGTATACGATGAGACGGTTACAGTGACAAAGAAAATGGTGAACCTTACCATGTATGGTGATGGTGGTTTAAAGAGTATCATAACCGGCAACAAAAACTTCGTTGATGGAGTTAGAACTTTCCAAACTGCATCATTCGTGGTACTTGGAGATGGATTCATAGGCAGGAACATGGGATTTAGAAACACAGCCGGTGCCATAAAGGAACAAGCCGTGGCCGTCAGAGTCCAAGCAGATTGCTCCATATTCCTCAACTGCAACTTCGAAGGTTACCAAGACACACTATACGCACAAACCCATAGACAATTCTACCGCGACTGTGTCATTTCTGGCACAATCGATTTCATCTTCGGCCATGCCTCCGCAGTCTTCCAAAATTGCCAATTGGTTCTTAGAAAGCCACTTGACAACCAAAAAAACATCATTACCGCGAATGGAAGAATCGACTCAAAATCAAACACCGCATTCGTCTTACAAAAATGTGTCATCAAGGGTGAAAATGACCTACCTCCAACAACCAAGAACTACATTGGAAGACCATGGAAGGAATATTCAAGGACAATTATCATGGAATCTGACATTCCTGCATTGATTCAACCTGAAGGTTGGTTACCATGGGAAGGTGATTTTGCACTAAAAACATTGTATTATGGTGAGTATAACAATGTTGGAGCTGGTGCTAAGACTGATGTTAGAGTTAAGTGGATCGGACGCAAAGATATTAAGAGGGGAGAGGCTCTTACTTATACTGTTGAACCTTTCTTGGATGGGTCATGGATTAATGGTACTGGTGTGCCTGCTCATTTGGGATTGTACAATTGA 1902 0.4253 MAFEDFDLVSERRKANAKQHLKKKILIGVTSAVLIACVIAAVTFVIVKRSGPDHNNNRKPVQNATPEPERVDKYSRLVKMLCSHSEYKEKCVTTLKEALKKDPKLKEPKDLLMVSMLVAKNEINKAFNKTANLKFASKEEKGAYEDCKQLFEDAKEEMGFSITEVGQLDISKLSSKEAELNNWLSAVISYQQTCSDGFPEGELKKKMEKIFAESRQLVSNSLAVVSQVSQIVNAFEGGLSGFKLPWGKTDAHAPAPDADADAVADDDEDLADAPDGAPGADQPIFEAPIGAPGAAPIGAPRAAAPPSWAAPAVDLPGSTEKPTPNVTVAQDGSGDFKTISEALAAIPQTYKGRYVVYVKEGVYDETVTVTKKMVNLTMYGDGGLKSIITGNKNFVDGVRTFQTASFVVLGDGFIGRNMGFRNTAGAIKEQAVAVRVQADCSIFLNCNFEGYQDTLYAQTHRQFYRDCVISGTIDFIFGHASAVFQNCQLVLRKPLDNQKNIITANGRIDSKSNTAFVLQKCVIKGENDLPPTTKNYIGRPWKEYSRTIIMESDIPALIQPEGWLPWEGDFALKTLYYGEYNNVGAGAKTDVRVKWIGRKDIKRGEALTYTVEPFLDGSWINGTGVPAHLGLYN 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01964 633 FunFam Pectinesterase 74 229 - -
Mepo6g01964 633 PANTHER PECTINESTERASE 38 621 - -
Mepo6g01964 633 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 229 IPR035513 -
Mepo6g01964 633 ProSitePatterns Pectinesterase signature 2. 469 478 IPR033131 -
Mepo6g01964 633 SMART PMEI_2 73 224 IPR006501 GO:0004857
Mepo6g01964 633 Pfam Pectinesterase 325 617 IPR000070 GO:0030599|GO:0042545
Mepo6g01964 633 Pfam Plant invertase/pectin methylesterase inhibitor 77 223 IPR006501 GO:0004857
Mepo6g01964 633 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 228 IPR035513 -
Mepo6g01964 633 MobiDBLite consensus disorder prediction 260 274 - -
Mepo6g01964 633 SUPERFAMILY Pectin lyase-like 322 626 IPR011050 -
Mepo6g01964 633 Gene3D - 319 631 IPR012334 -
Mepo6g01964 633 MobiDBLite consensus disorder prediction 250 332 - -
Mepo6g01964 633 NCBIfam pectinesterase inhibitor domain 72 228 IPR006501 GO:0004857
Mepo6g01964 633 CDD PMEI-like_3 81 229 - -
Mepo6g01964 633 FunFam Pectinesterase 319 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01964 Mepo-Chr6 22932209 22935000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01964 1 633 Carbohydrate Esterase AT2G26450 42.411 3.49e-172 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01964 - - gmx:100796485 766.148