Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01943 ATGGGTTCAAGATCTGTGGAAGGAGAACAATCATCATTCGCTGACGATTATGATGCCTTGATTTCGACGACTGATGTTGAGCTTCTCAAGCGAGCTTGGCGTAATGAAAAGGCAGCCCCTGAGATTCTTCGTTTTGAATCTGATTTGATCAACCGTGTCAAAGGACAGATTGAATTGATGGAAGAAACTGTGGAGGAGAAATTGTCTGTTGGTAGTGACCCTCTTTCAGTATCTCTGTATCAGATGGACTTAGATAGAACCTTATTTCTATTAAGATCATATCTTCGCATCCGCATCCTGAAGATCGAAAAGTACATGTTCCACATTCGAAAAACCCAAGAACTTTGGAACAGGCTTTCAAGGGATGAGAAACTTTTCACTGAAAGGTGCACAGATGACCTGAAGGAACATCTGGAGAGCAGTGTTCTATCAAAACTGCCTGAAAATTATCAGTCTTATGAGAGACAATCTGTCATTAGTGAAGAGGATGACATGGTTCCACAACCCCGACTAGACACATTTGTTTTGTGTAGAAGTAAAGAATATCTCACAGGAATTCAACTTGAAGATGGACCTGTTGACGACAGGTCGAAGCTGTTTGAGATGGAGCCTGATGTCCTTTACTTCATATGTTACAAGTCGATAAAACCACTTGTAGAGAGTGGGAAAATTGATCTACTATGA 684 0.4094 MGSRSVEGEQSSFADDYDALISTTDVELLKRAWRNEKAAPEILRFESDLINRVKGQIELMEETVEEKLSVGSDPLSVSLYQMDLDRTLFLLRSYLRIRILKIEKYMFHIRKTQELWNRLSRDEKLFTERCTDDLKEHLESSVLSKLPENYQSYERQSVISEEDDMVPQPRLDTFVLCRSKEYLTGIQLEDGPVDDRSKLFEMEPDVLYFICYKSIKPLVESGKIDLL 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01943 227 Pfam DNA replication complex GINS protein SLD5 C-terminus 169 227 IPR031633 -
Mepo6g01943 227 SUPERFAMILY PriA/YqbF domain 171 227 - -
Mepo6g01943 227 CDD GINS_A_Sld5 25 143 IPR038749 -
Mepo6g01943 227 PIRSF GINS_Sld5 1 227 IPR008591 GO:0006261
Mepo6g01943 227 FunFam DNA replication complex GINS protein SLD5 10 217 - -
Mepo6g01943 227 SUPERFAMILY GINS helical bundle-like 22 157 IPR036224 -
Mepo6g01943 227 Gene3D - 12 217 - -
Mepo6g01943 227 PANTHER SLD5 PROTEIN 11 227 IPR008591 GO:0006261
Mepo6g01943 227 CDD GINS_B_Sld5 169 227 IPR031633 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01943 1 174 Core DNA Replication Machinery Family AT5G49010 60.345 6.98e-67 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01943 K10735 - gmx:100784291 336.65