Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01927 ATGCTCTCTTCTTTATCAGCTATGGAATACGGTGGAGGCTCGAAAGTAACCGGGATTAGGCAGATTGTGAGACTCAAAGAAATTCTTCAAAAGTGGCAAAATGTCACAATAAGCTCAAAAACTTCCAACCCCAAACTTGAAATAACTGATGGTGCCAGATCACCAATGATCAACAAAAGGATAACAAATGTCATAAGTTGTGACTCTGATGAGGAAAGCTGCCAAAGTCCTGAACCACCACCTGATGTTCCGAAAGGCTTCTTGGCAGTCTATGTTGGACCCGAGCTTCGACGGTTCATTATTCCAACTAGCTACCTTAGCCATTCCTTATTCAAAATGTTGCTGGAAAAGGCTGCTGAGGAATTCGGATTTGATCAGAGCGGCGGGCTCACAATACCATGTGAGATTGAGACCTTTAAATATCTACTCAAATGCATTGAGACCCAAGAGAAAGAACAACATGATGAGAGCTTGTCTCGAAACCTAGAAACAGAAGAAAACTTGGAAGAGTAA 513 0.4211 MLSSLSAMEYGGGSKVTGIRQIVRLKEILQKWQNVTISSKTSNPKLEITDGARSPMINKRITNVISCDSDEESCQSPEPPPDVPKGFLAVYVGPELRRFIIPTSYLSHSLFKMLLEKAAEEFGFDQSGGLTIPCEIETFKYLLKCIETQEKEQHDESLSRNLETEENLEE 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01927 170 Pfam Auxin responsive protein 66 146 IPR003676 GO:0009733
Mepo6g01927 170 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 66 142 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01927 Mepo-Chr6 22510993 22513787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01927 8 166 Calmodulin-binding Proteins AT3G43120 66.867 2.79e-74 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01927 K14488 - cpap:110808074 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01927 6 22510993 22513787 Mepo6g01927 6 22510993 22513787 ECH
Mepo1g00534 1 5112860 5113971 Mepo6g01927 6 22510993 22513787 PCT