Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01926 ATGATGGAAGATGGCCATGGTAGTCCCATTCAGATTCCTCCTTTTCTGAAAAGCACTTATGAAATAGTTGAAGATTCTTTAACTAATTCCATTGTTTCCTGGAGTGCTAACGGTAGAAGTTTCATTGTTTCGAATCTATTCGATTTTGAAAAAGATGTGTTACCTAGATACTTTAAGCATAATAACTTCTCAAGTTTCAAGAGACAATTGAATACCTATGGATTTAGAAAAGTTTCCTCAGAAAAATGGGAATTCGCAAACAATAATTTTGTAAAAGATCAACCACATCTGATGGAGAATATCCATAGGCAAAAACCTGTTCATAGCCATTCTTTGCAGAATACACATGGACAAGGGGCTGCTACTCCACTAAGTGAAATAGAATGCCGGAATTTGAACGCTATAATTGAAAATCTTAAAAATGAAAACGAACATATTCTTCTTGAACTTCAGACAAAGGAAGAAGAGGAGAAAATTCACGAGACACAGTTACATTACTCAAAGGAGCGTTTGAAAGTGTTTGAACAGGAGCAGCAAAGTATGCTCTCTTCTGTTGGTCAAGTGTTGCATAAACCTGAGATTGAAGGTCTGATCTGGTCACCGACAGAAAATACGGAGAGAAAAAGGAGGTATCCTAGAAATAGTCCTTTTGGTAATGAAGCTAGCACTCAAAATCTGGTGGGAAATTCTCAAGAATTACCAAGAGAAAGTGAAGAGAATGTATTCGTTCTCTCATTAAACATGGAACGATCGAATCTGCTCGAGTCATCAATGGATGTTTTGGAGAGTATTGGAATTGGAATTGCTCCTGAGCCAAATGTAGTTGTTAGTCCTGATCCTATTTCAACTGAGCCGGAGGTAATCATTGATGCTAATCTTGGTGCAACTGAGCAAGCGGTAATCAATGATCATGATCTGGTATCACCTGAGCCAAGTGTTCCTTCCGTCTAA 951 0.3796 MMEDGHGSPIQIPPFLKSTYEIVEDSLTNSIVSWSANGRSFIVSNLFDFEKDVLPRYFKHNNFSSFKRQLNTYGFRKVSSEKWEFANNNFVKDQPHLMENIHRQKPVHSHSLQNTHGQGAATPLSEIECRNLNAIIENLKNENEHILLELQTKEEEEKIHETQLHYSKERLKVFEQEQQSMLSSVGQVLHKPEIEGLIWSPTENTERKRRYPRNSPFGNEASTQNLVGNSQELPRESEENVFVLSLNMERSNLLESSMDVLESIGIGIAPEPNVVVSPDPISTEPEVIIDANLGATEQAVINDHDLVSPEPSVPSV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01926 316 SMART hsfneu3 11 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo6g01926 316 SUPERFAMILY "Winged helix" DNA-binding domain 10 103 IPR036390 -
Mepo6g01926 316 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 5 229 IPR027725 -
Mepo6g01926 316 FunFam Heat stress transcription factor B-4 8 105 - -
Mepo6g01926 316 Pfam HSF-type DNA-binding 15 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo6g01926 316 PRINTS Heat shock factor (HSF) domain signature 53 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo6g01926 316 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo6g01926 316 PRINTS Heat shock factor (HSF) domain signature 15 38 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo6g01926 316 MobiDBLite consensus disorder prediction 205 224 - -
Mepo6g01926 316 Gene3D - 8 105 IPR036388 -
Mepo6g01926 316 Coils Coil 129 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01926 Mepo-Chr6 22498308 22500195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01926 1 220 HSF AT4G18880 53.812 6.74e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mepo6g01926 HSF_DNA-bind 1.3e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01926 K09419 - gmx:100820566 273.863