Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01883 ATGGTGAAGTCGAATGTGGAAAAACCTACGACAGAACGAAGTGATTCATCATTGTACCGTGGAGTACGGAAGAGGAAGTGGGGGAAATATGTGTCGGAAATTAGATTACCAAACAGCCGTCAAAGAATATGGTTAGGTTCTTACGACTCCGCCGAGAAGGCGGCGCGTGCTTTCGACGCGGCGATGTTTTGCTTACGTGGCAGTGGTGCTAAGTTTAATTTCCCTAATGATCCACCAAACATTGCTGGAGGAAGAACAATGACTCCTTCTGAGATTCAAGCTGCTGCAGCCCGTTTTGCTAATTCGGGTGTCCATAATGAGAATCCGGGTCGACCCGATAATGACGTGGTGGAATATGAGTCGTCGTCGGAGGGGACTGCATTGTTGGCTATGGAATCTGAAGCACTGTCTCCGGCAATGTCAGAATCAACGGTTCAGACAGATTGTGATTCAAAGCAAAACAGGTTGTTTTCCGATTTGTTTGCGGTTGATGGGTTGGGTAGGTTTGAACCGGATTACTCGGTTTTTCCGGGTTTTGATGATTTTGGTGGTAACTTTTATGAGCCGGATATGCCAATTTATGATTATGGAGAAGAGAACTTGGATGGGTTGGTGGTTCATGATTCCTTTTTGTGGAACTTAGATTGA 648 0.4568 MVKSNVEKPTTERSDSSLYRGVRKRKWGKYVSEIRLPNSRQRIWLGSYDSAEKAARAFDAAMFCLRGSGAKFNFPNDPPNIAGGRTMTPSEIQAAAARFANSGVHNENPGRPDNDVVEYESSSEGTALLAMESEALSPAMSESTVQTDCDSKQNRLFSDLFAVDGLGRFEPDYSVFPGFDDFGGNFYEPDMPIYDYGEENLDGLVVHDSFLWNLD 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01883 215 FunFam Ethylene-responsive transcription factor 2 17 76 - -
Mepo6g01883 215 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
Mepo6g01883 215 Pfam AP2 domain 18 67 IPR001471 GO:0003700|GO:0006355
Mepo6g01883 215 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
Mepo6g01883 215 Gene3D AP2/ERF domain 18 76 IPR036955 GO:0003700|GO:0006355
Mepo6g01883 215 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Mepo6g01883 215 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Mepo6g01883 215 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 136 - -
Mepo6g01883 215 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
Mepo6g01883 215 SUPERFAMILY DNA-binding domain 17 76 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01883 Mepo-Chr6 21686858 21687982 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01883 17 214 AP2-EREBP Transcription Factor Family AT1G19210 47.783 2.14e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo6g01883 AP2 3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01883 - - mtr:11441685 280.796