Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01872 ATGTCTACCTCATCGGAATATTCAGAAGTTTCCGGCAACAAACCACCGGCAAAGTCACCGGAGAAAACAACTTTCTCTCAAACATGCAGTTTATTGAGTCAATATATTAAGGAAAAGGGTTGCTTCAAAGATCTTTCTCTTGGTATCACATGCAATAACAATAACACAGACCCTTCTGGGTCTTCTGAGACTTCTTCTCAATCTGCAACAACCATGAACTTGTTTCCAACCATGGAAAACAATTTGACACAAAAGAACCTTACAACTATGGATTTGCTCACTCCACAAGCTGCTTTGAACAATTCCAATGCTATCAAGGGACCTAAAGCTGCACAATTGACAATGTTTTATAACGGTCAAGTTATTGTATTCGATGATTTTCCTGCCGATAAAGCCCATGAGCTCATGGCTTTTGCTAACAAAGGAATCTCTCAAACTCAGAACAATTCTGTATACACTTACACACAGAGCCAGCCTTCATTTCCTCCTAATTTGGTCAGAACTTCGGTTAACACGACCGCTCCGATTGTTCCTACCGTGAACATCATCCCTAGTACTGCCACCGGCACCAGCTCGATTAATGAACACCTTCAAGTGCCTTCCAGACCTAATCTTTGCGATCTGCCAATTATGAGGAAAGCTTCGCTTCATCGGTTTCTGGAGAAGAGAAAGGATAGAATTGCTGCCAATGCACCATACCAAGTTAATAAGCCAGCTGAGTCCATGTCATGGCTTGTGGGTGCAAAATCAACTCAAATTTGA 762 0.4186 MSTSSEYSEVSGNKPPAKSPEKTTFSQTCSLLSQYIKEKGCFKDLSLGITCNNNNTDPSGSSETSSQSATTMNLFPTMENNLTQKNLTTMDLLTPQAALNNSNAIKGPKAAQLTMFYNGQVIVFDDFPADKAHELMAFANKGISQTQNNSVYTYTQSQPSFPPNLVRTSVNTTAPIVPTVNIIPSTATGTSSINEHLQVPSRPNLCDLPIMRKASLHRFLEKRKDRIAANAPYQVNKPAESMSWLVGAKSTQI 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01872 253 ProSiteProfiles Tify domain profile. 106 141 IPR010399 -
Mepo6g01872 253 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 19 240 IPR040390 -
Mepo6g01872 253 SMART tify_2 106 141 IPR010399 -
Mepo6g01872 253 MobiDBLite consensus disorder prediction 1 23 - -
Mepo6g01872 253 Pfam Jas motif 209 234 IPR018467 -
Mepo6g01872 253 Pfam tify domain 108 140 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01872 Mepo-Chr6 21557241 21559725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01872 1 245 Tify Gene Family AT1G19180 38.095 8.95e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mepo6g01872 tify 2.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01872 K13464 - gmx:100801449 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01872 6 21557241 21559725 Mepo6g01872 6 21557241 21559725 ECH
Mepo1g00520 1 4945192 4946495 Mepo6g01872 6 21557241 21559725 PCT