Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01850 ATGGCATCTGATTCCAACGCTACGAACATGCTCCAAGCAATTCGCTACAACCGTGGTTCTCTTCAGCTTCTCGATCAGACAAAGCTTCCTTTAGAAAGCGTTTACTTGGAAATTCGTGATTCTAATGATGGCTGGAATGCTATACGAGATATGGTTGTCCGGGGAGCACCTGCTATTGCAATTGCAGCGGCACTTTCGCTGGCTGTGGAGGTGTCCAATTTAGATGATTTTAATGGGTCTACTGATGGCGCTGTTTATTTCCTGCAGAAGAAGTTGGACTATCTTGTCTCGAGTCGGCCAACCGCGGTTAACTTATCAGACGCTGCGACCAAACTAAAAGAAATCATATCTAAGGCTGCTGCTACCACTTCAGAGGCCAAGGGCGTGTTTCAGACTTATCTAGAGGCTGCTGAAATAATGCTTGAGGATGATGTTGCATCGAACAGAGCAATTGGAACTCATGGAGCTAGTTTTATTCAAAACCAAACTGAAAAACTGAAGCTTTCTGTTTTGACCCATTGCAATACTGGAAGTTTGGCTACAGCTGGATATGGTACTGCTCTTGGTGTAATCCGTGCACTTTACAGCGGGGGAGTTTTAGAAAGGGCTTACTGCACAGAAACACGCCCCTTCAATCAAGGATCCAGACTTACTGCCTATGAGTTGGTACACGACAAAATACCTGCAACTCTTATAGCAGATTCTGCTGCGGCTGCATTAATGCAAGCAGGGCGTGTGGATGCTGTTGTTGTTGGCGCAGATCGTGTTGCATCAAATGGTGACACAGCAAACAAGATTGGAACTTATAGTGTTGCCTTATGTGCCAAGTTTCATAATGTACCTTTTTTTGTGGCTGCGCCCTTGACTTCCATTGATCTATCACTTTCTTCTGGACAACAAATTGTCATTGAAGAGAGATCTCCCAAGGAGTTGTTGAACACGCGTGGAGGACTCGGAGAGCAGGTTGCTGCCTCAGGAATATCTGTGTGGAATCCAGCTTTTGATGTTACACCTGCTAATCTAATATCTGGGATCATCACTGAGAAAGGTGTTATTACAAAGACGCCTGCTGGTGATGCTTTTGACATAAAAGCTTTCGTACAGAAAACAGGTTAA 1116 0.4471 MASDSNATNMLQAIRYNRGSLQLLDQTKLPLESVYLEIRDSNDGWNAIRDMVVRGAPAIAIAAALSLAVEVSNLDDFNGSTDGAVYFLQKKLDYLVSSRPTAVNLSDAATKLKEIISKAAATTSEAKGVFQTYLEAAEIMLEDDVASNRAIGTHGASFIQNQTEKLKLSVLTHCNTGSLATAGYGTALGVIRALYSGGVLERAYCTETRPFNQGSRLTAYELVHDKIPATLIADSAAAALMQAGRVDAVVVGADRVASNGDTANKIGTYSVALCAKFHNVPFFVAAPLTSIDLSLSSGQQIVIEERSPKELLNTRGGLGEQVAASGISVWNPAFDVTPANLISGIITEKGVITKTPAGDAFDIKAFVQKTG 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01850 371 Gene3D - 10 165 IPR027363 -
Mepo6g01850 371 Gene3D - 166 362 IPR042529 -
Mepo6g01850 371 FunFam Methylthioribose-1-phosphate isomerase 9 200 - -
Mepo6g01850 371 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 12 354 IPR005251 -
Mepo6g01850 371 SUPERFAMILY NagB/RpiA/CoA transferase-like 8 355 IPR037171 -
Mepo6g01850 371 Pfam Initiation factor 2 subunit family 53 353 IPR000649 GO:0044237
Mepo6g01850 371 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 7 368 - -
Mepo6g01850 371 FunFam Methylthioribose-1-phosphate isomerase 166 364 - -
Mepo6g01850 371 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 11 363 IPR005251 -
Mepo6g01850 371 NCBIfam S-methyl-5-thioribose-1-phosphate isomerase 39 354 IPR011559 GO:0044249
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01850 50 369 Eukaryotic Initiation Factors Gene Family AT2G05830 76.012 1.68e-168 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01850 K08963 - gmx:100799311 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01850 6 21305593 21309517 Mepo6g01850 6 21305593 21309517 ECH