Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01849 ATGCAGAAGAATCTGAAGAAATCGCCGTTACCGTTGATCGAAACCATTGGGAACAAGAAGAAATTGGAATTGTGTAGCAAGGAATCGCTTGTGAAGGTTCTTAGATGGCATTTTGGGTATCCTGATTTTAGGGGTTTGCAATTGGAAGCTATTCAAGCTGTGCTTTCAGGAAGAGATTGTTTTTGTCTAATGCCAACTGGAGGAGGCAAGTCGATGTGTTATCAGATCCCTGCATTGGCAAAAGAAGGAATTGTGCTTGTTGTTTGTCCTTTAATAGTGATGGCACTAAAGGAGAAAGGAATTGCTGCAGAGTTTCTCTCCTCAACTAAAACAGCAAAAGCAAAAGATAAGATTCATGAGGACCTTGGTTCTGGAAAACCGTCTACAAGGCTGCTATATGTTACACCAGAGTTGATAGCAACCCCAGGGTTTATGTCAAAGCTGACGAAGATTCATTCCAGGGGTTTGCTAAGTCTCATTGCCATTGACGAGGCACATTGCATCTCTTCCTGGGGTCATGATTTCAGACCTAGCTACCGTAAGCTTTCAACTCTGAGAAGCCACCTACCAGATGTACCAATATTAGCTCTAACCGCTACTGCTGTTCCTAAGGTTCAGAAGGATGTAGTGGAATCATTGCACATGCAAAATGCATTAATACTGAAGACTTCTTTTAACCGTCCTAATATATATTATGAAGTTAGGTACAAAGATCTATTGGACAATGCTTATTCTGATTTATCTGATAGACTCAAATCTATGGGCGATGTTTGTGCGATAATTTACTGCCTTGAACGTTCCATGTGTGATGACTTGTCAGCTCATCTATCCCAAAGTGGCATTTCTTGTGCTGCTTATCACGCAGGACTGAATAATAAAATGCGAACTTCTGTGCTACATGATTGGATTTCTTCAAAAACAAAAGTTGTTGTTGCCACTGTCGCTTTTGGGTATGGCATCGATAGAAAGGATGTGAGAATTGTGTGCCACTTCAATATTCCAAAGTCAATGGAAGCATTCTATCAAGAGTCCGGCAGAGCTGGTCGTGATCAATTGCCCTCTACAAGTCTGTTGTACTATGGAGTAGATGATCGCAGAAGAATGGAATTTATATTACGCAACTCAGGTAGCAAGAAATCACAATCATCAAGTTCACAAGAAGAATCAACCAGAATGTCCCTGACTGCTTTCAATCAGATGGTTGAATATTGTGAAGGATCTGGATGTCGTAGGAAAATAATTCTCGAGAGTTTTGGGGAGCAGGTAACAACATCACTATGTGGAAAAACATGCGACTCCTGTAAACACCCAAACTTAGTTGCCAGAAATTTGGAGGATCTTTCAGCTGCTTGTGCTCTACATCAGAGAGGCGGTTCTCGAGTTTTCATTACCAGTTCCACTGAAGCAATTGATGGAGGACAGTTATCTGAATTCTGGAACCGAGATGAGGAAGCAAGTGGATCAGAGGAAGATATTTCCGACATAGATGGTGACGGTAATGAGGTGGTCAACAATCTAGCCCGGTCAAAGGGTCAATCCAGACTGGGAGTAAATGAAAAGCTTGATTTGTTACAGAGGGCAGAAGAAAAGTACTATCAAAATGAGAATACTAATAAACAGAGAAACAAAATTGACAAGAATGCTATTTCTGATGCATTGCGAGAGGCAAGCAGGCAGAGATTACAAAATGCTTTAAAAGAGGCTCAGCAACGGCTTGACGACTTTAAGATTGAAATGGAAACCTCGGCATCTCTTCTCGAGGATGAATGCTACAAGAAATATGGCAAGACTGGCAAATCATTCTATTATTCCAAAGTGGCAAGTACTATCAGGTGGTTGAAAACTACAAGTTTCGTCGATCTGATGAACCGACTTTGTGAAAGTGATGCTTCCTTATCACCGAGTGTCTTCTCTGGAGCTGAACATCTCCTCACACCGCTACCTGCTTCAGATCCTTGTGCAAAAGAAGAAACTGTCAATGAGCTCGCAGTAAATGCTGAAGAAACTGGCAATGAGCTCTCAGGAAATGCTATAACAGAAACAATCCCATGTGATATGCCAATAGAAAGTTCTTTTAATACAAACTTACCACCAATACCATCCTTTGCTGAATTTGTAAATAGTAAGAAAGAGAAAAGAGATCGATCAAGTGACACAAAGAAACACTCATCAAGAGTAGAAAAGAAGATGAGGATACAGTAG 2202 0.4092 MQKNLKKSPLPLIETIGNKKKLELCSKESLVKVLRWHFGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIVLVVCPLIVMALKEKGIAAEFLSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPELIATPGFMSKLTKIHSRGLLSLIAIDEAHCISSWGHDFRPSYRKLSTLRSHLPDVPILALTATAVPKVQKDVVESLHMQNALILKTSFNRPNIYYEVRYKDLLDNAYSDLSDRLKSMGDVCAIIYCLERSMCDDLSAHLSQSGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVATVAFGYGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDRRRMEFILRNSGSKKSQSSSSQEESTRMSLTAFNQMVEYCEGSGCRRKIILESFGEQVTTSLCGKTCDSCKHPNLVARNLEDLSAACALHQRGGSRVFITSSTEAIDGGQLSEFWNRDEEASGSEEDISDIDGDGNEVVNNLARSKGQSRLGVNEKLDLLQRAEEKYYQNENTNKQRNKIDKNAISDALREASRQRLQNALKEAQQRLDDFKIEMETSASLLEDECYKKYGKTGKSFYYSKVASTIRWLKTTSFVDLMNRLCESDASLSPSVFSGAEHLLTPLPASDPCAKEETVNELAVNAEETGNELSGNAITETIPCDMPIESSFNTNLPPIPSFAEFVNSKKEKRDRSSDTKKHSSRVEKKMRIQ 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01849 733 MobiDBLite consensus disorder prediction 706 733 - -
Mepo6g01849 733 SMART helicmild6 270 351 IPR001650 -
Mepo6g01849 733 FunFam ATP-dependent DNA helicase 24 226 - -
Mepo6g01849 733 Pfam RecQ zinc-binding 364 435 IPR032284 -
Mepo6g01849 733 Pfam Helicase conserved C-terminal domain 257 349 IPR001650 -
Mepo6g01849 733 CDD DEXHc_RecQ 32 226 - -
Mepo6g01849 733 NCBIfam RecQ family ATP-dependent DNA helicase 32 439 IPR004589 GO:0004386|GO:0006310
Mepo6g01849 733 FunFam RecQ family DNA helicase 227 452 - -
Mepo6g01849 733 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 363 IPR027417 -
Mepo6g01849 733 Pfam DEAD/DEAH box helicase 46 206 IPR011545 GO:0003676|GO:0005524
Mepo6g01849 733 CDD SF2_C_RecQ 227 360 - -
Mepo6g01849 733 Gene3D - 13 226 IPR027417 -
Mepo6g01849 733 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 239 391 IPR001650 -
Mepo6g01849 733 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 51 219 IPR014001 -
Mepo6g01849 733 Gene3D - 227 453 IPR027417 -
Mepo6g01849 733 MobiDBLite consensus disorder prediction 704 733 - -
Mepo6g01849 733 Coils Coil 558 585 - -
Mepo6g01849 733 PANTHER DNA HELICASE RECQ FAMILY MEMBER 21 590 - -
Mepo6g01849 733 SMART ultradead3 39 235 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01849 Mepo-Chr6 21294196 21303865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01849 33 349 Eukaryotic Initiation Factors Gene Family AT3G19760 23.077 1.10e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01849 K10901 - gmx:100819601 1102.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01849 6 21294196 21303865 Mepo6g01849 6 21294196 21303865 ECH