Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01835 ATGCGTCAAATCATTCAAGCACATCGAAAGACGAATTCCTTTGGGATTTATACCAAGTTGGGATGCTTATTGTTGAATATAGACGCAAAGCAAGTATATCTATTTCAATATGAACCATGGGATGAGATAGCTTTTTGGCCACAAAGGTTTTTGGTGCAGTTGGAGCAAGAGCTCGAACGTGTTAGACAACAGGGAATGTATATGGGTGGTGGATTGGATTCTAATAATATGTGTTTTGCTGGACATGTGAATCCAGGGATTGTAGCCTTTGAGATGGAGTATGGACATTGGGTTGACGAGCAAAACAGGCAAATCTCGGAATTGAGAAATTCTTTAAACGCGCATATTAGTGACATAGAGCTTAGGATGCTGGTCGATGGTATGATGAACCACTATGCTGAAATCTATCGCATGGAATCTGCGGCTGCAAAAACAGATGTTTTTTATGTGATGTCCGGCATGTGGAAAACAACTGCTGAAAGATTTTTCTTGTGGATCGGTGGATTCCGCCCTTCTGAGCTTCTCAAGATTCTTCGTCCAATGATTGAACCCTTGACAAAGCAACAACGGTTGGATAGCGATAACCTTGGACAATCATGTCAACAAGCAGAAGATGCCCTTGCATCTTTTATAATTTCTTCAAATTATCAGCCTCATTACAACTTAAACCTACAGAGCATATCTGTCAACGACCAGACACTTCAAATCGATCCATCAGTTTTTGCAACATCAAGCAACAAAGGCACCATTGTTGATTCTGGAACAACTTTAGCATACCTTGTAGAAGAGGCTTATGATCCCTTTGTCAATGCGCGTCAGAGATATTTCCTCAAGAAGAAGCTTCAATGCACTTTGTTTGGCTCCTATGTTGATGATCTGAACACATATTTGGCTTCTCGAGATACTTCTACTACTGTTGTGGCTATTCATTCAGTTGGCGAAGGTGAAAACCTTCCAAGTGGTCCGGCTCTCCGACCAACAGTCCATGAACTTCTGGAAAGGCTTAAAGAACTTCAGAGACGGTATATCATTCAGTTCTAA 1041 0.4121 MRQIIQAHRKTNSFGIYTKLGCLLLNIDAKQVYLFQYEPWDEIAFWPQRFLVQLEQELERVRQQGMYMGGGLDSNNMCFAGHVNPGIVAFEMEYGHWVDEQNRQISELRNSLNAHISDIELRMLVDGMMNHYAEIYRMESAAAKTDVFYVMSGMWKTTAERFFLWIGGFRPSELLKILRPMIEPLTKQQRLDSDNLGQSCQQAEDALASFIISSNYQPHYNLNLQSISVNDQTLQIDPSVFATSSNKGTIVDSGTTLAYLVEEAYDPFVNARQRYFLKKKLQCTLFGSYVDDLNTYLASRDTSTTVVAIHSVGEGENLPSGPALRPTVHELLERLKELQRRYIIQF 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01835 346 SUPERFAMILY Acid proteases 214 278 IPR021109 -
Mepo6g01835 346 ProSiteProfiles DOG1 domain profile. 87 345 IPR025422 GO:0006351|GO:0043565
Mepo6g01835 346 Coils Coil 98 118 - -
Mepo6g01835 346 Gene3D Acid Proteases 205 302 IPR021109 -
Mepo6g01835 346 PANTHER TRANSCRIPTION FACTOR TGA9 51 208 - -
Mepo6g01835 346 Pfam Xylanase inhibitor C-terminal 219 279 IPR032799 -
Mepo6g01835 346 Pfam Seed dormancy control 104 179 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01835 Mepo-Chr6 20914458 20921203 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01835 51 208 Calmodulin-binding Proteins AT5G10030 68.987 2.68e-76 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01835 K14431 - gmx:100793353 266.544