Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01833 ATGAAACTCAAATGGAAATCAATTTTCCCAGCAAGTTGCTTCAAAGGAGAGTATCCATCACCAAAACCAAAGAAAGTGGTAGCTACAAGACCAAGAAGTGCTTCAACATCAACTCATAGGATTTCAATAGAGGAATTGAGTAATCCGAACGCAACCGGAGATTTATCGATTTCTCTAGCAGGATCCAATCTTTATGCGTTTACAGTAGCTGAGCTTAAGGTTATAACACAACAGTTTTCTTCTAGTAATCATCTTGGTGCTGGTGGGTTTGGACCTGTTCATAAGGGGTTTATAGATGATAAGGTTAGGCCTGGTTTGAAGGCTCAATCTGTTGCTGTTAAACTCTTGGACTTAGAAAGCAAACAAGGTCACAAAGAGTGGTTGACTGAAGTTGTTGTACTGGGGCAATTAAGGCATCCACACCTTGTGAAGCTAATAGGATATTGTATTGAAGATGAACATAGACTTTTGGTATATGAATATTTACCAAGAGGCAGCTTGGAAAATCAATTATTTAGAAGATTCTCAGCATCACTACCATGGTCAACAAGAATGAAAATTGCTGTTGGAGCTGCAAAAGGTTTAGCCTTTCTTCATGAAGCTGAGCAGCCAGTTATTTTTAGAGATTTCAAAGCTTCAAACATCTTGTTAGACTCAGATTATAATGCAAAACTCTCTGACTTTGGGTTGGCAAAAGATGGTCCAGAAGGAGATGACACCCACGTTTCAACAAGAGTTATGGGTACTCAAGGGTATGCTGCCCCAGAATATGTCATGACAGGTCACTTGACGGCCAAGAGTGACGTGTATAGCTTTGGAGTAGTTTTGTTGGAATTGCTAACAGGGAGAAAGTCAGTGGACAAAAATCGTCCTCAAAGGGAACAAAACCTAGTAGATTGGGCAAGACCAATGTTAATTGATTCAAGAAAAATTAGCAAAATTATGGATCCAAAACTTGAAGGACAATATTCTGAAATGGGTGCTAAAAAAGCAGCTTCATTGGCTTATCAGTGTCTTAGCCATAGACCAAAGAGTAGGCCAACAATGAGCAATGTGGTTAAAATTTTGGAACCTCTACAAGATTTTGATGATATTCCAATTGGACCATTTGTTTACACTGCTCCAATTGATAATAATGAAGTGGCTAAAGAAAAAGATCAAGCAAGGGAATATGAAACAAATAAGGAGAGGAGGAGGGAAAATGATAAATATCATAGGAATGGTCATAGGCATCATCCACTTAAATCTCCAAAGTCGCCAAGTCCTCAATCACAACCTCAATCACGACCACAATCACGACCACGACCACATCTGCAGATTGACAAGCATCGAAATGGTAGAGAAAGTGGGTCAAATTCTCCTTTGCCACACATAAATCGAAATGGTAGAGAAAGTGGATCAAATTCTCCTTCACCACACATAAATCGAAATGGTAGAGAAAGTGGGTCAAATTCTCCTTTGCCGCGCAAAAATCGAAATGGTAGAGAAAGTGGGTTAAATTCTCCTTTACCACACATAAATCAAAATGGCAGAGGAAGTGGGTCAGATTCTCCTTCGCCAAATAAAAATAGCTATGAAAATTAG 1584 0.3914 MKLKWKSIFPASCFKGEYPSPKPKKVVATRPRSASTSTHRISIEELSNPNATGDLSISLAGSNLYAFTVAELKVITQQFSSSNHLGAGGFGPVHKGFIDDKVRPGLKAQSVAVKLLDLESKQGHKEWLTEVVVLGQLRHPHLVKLIGYCIEDEHRLLVYEYLPRGSLENQLFRRFSASLPWSTRMKIAVGAAKGLAFLHEAEQPVIFRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAKSDVYSFGVVLLELLTGRKSVDKNRPQREQNLVDWARPMLIDSRKISKIMDPKLEGQYSEMGAKKAASLAYQCLSHRPKSRPTMSNVVKILEPLQDFDDIPIGPFVYTAPIDNNEVAKEKDQAREYETNKERRRENDKYHRNGHRHHPLKSPKSPSPQSQPQSRPQSRPRPHLQIDKHRNGRESGSNSPLPHINRNGRESGSNSPSPHINRNGRESGSNSPLPRKNRNGRESGLNSPLPHINQNGRGSGSDSPSPNKNSYEN 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01833 527 Coils Coil 381 401 - -
Mepo6g01833 527 PANTHER OS01G0588500 PROTEIN-RELATED 42 360 - -
Mepo6g01833 527 CDD STKc_IRAK 85 359 - -
Mepo6g01833 527 Pfam Protein tyrosine and serine/threonine kinase 82 356 IPR001245 GO:0004672|GO:0006468
Mepo6g01833 527 Gene3D Phosphorylase Kinase; domain 1 40 161 - -
Mepo6g01833 527 MobiDBLite consensus disorder prediction 381 527 - -
Mepo6g01833 527 Gene3D Transferase(Phosphotransferase) domain 1 162 365 - -
Mepo6g01833 527 FunFam Serine/threonine-protein kinase BIK1 46 161 - -
Mepo6g01833 527 MobiDBLite consensus disorder prediction 449 527 - -
Mepo6g01833 527 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01833 527 SUPERFAMILY Protein kinase-like (PK-like) 55 357 IPR011009 -
Mepo6g01833 527 MobiDBLite consensus disorder prediction 381 403 - -
Mepo6g01833 527 FunFam Probable serine/threonine-protein kinase PBL8 162 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01833 Mepo-Chr6 20873044 20876348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01833 67 356 Glycoside Hydrolase AT3G07070 52.560 1.48e-98 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo6g01833 PK_Tyr_Ser-Thr 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01833 - - cam:101488466 750.355