Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01816 ATGAACAAGAACAAGTTTCCTTTTACTCCTTCACAATGGCAAGAACTTGAACATCAAGCTCTTATTTACAAGTACATGGCTTCTGGTATATCTATTCCACCTGATCTTCTTTTTACCATCAGAAAAAGCTATTTGGACTCTCCTCTTTCTTCAAGACTTTTTCCTAGTCAACAACACCAACACTTTGGATGGAACTATCTGCAAATGGGTTTAGGAAGAAAAATAGATCCAGAGCCAGGTAGATGTAGAAGAACAGATGGAAAGAAATGGAGATGCTCAAAAGAAGCATATCCAGATTCTAAATACTGTGAAAGACACATGCATAGAGGAAAAAACCGTTCAAGAAAGCCTGTGGAAGTTGCAAAAACAACAACAAATACAAATATTAATAATGCTTCAACACTTGGAATTTCATCACTTACCAAAAATAGCCCTGCATCATTAACTAATTCTTCTTCTTTGTCTTTTGAGACACAACAACATCACCAAAACTATCCTCAAAATTCTTGCTATGGTTCTAATTTGCAACAGTCCTTTATGTATCCTCATACAACTTCAAGGTCAACTTTGTCATCTGGTATTGGTTTGTCTTTTGAAGACAATAGTGCTCCCTTGTTTCTTGATACCAACACTTGCTCTCAGAATAACACTGATTACAGGAACAGGTATGTGTATGGACAAAAAGAAGAGGTTGATGAGTATGCATTCTTCAAAGAACCTTCTGGTAGCAGTACAATGAAAAGCTTCTCTGCTTCATCTATGGAACATGATCCTTGGCAACTAACACCACTCACAATGAGTTCTTCCTCATTATCTTCTACTTCTTTGAGACAGCGAAGCTTTTCGGCGTTGTCCAATGATTACTCTTGCTTGCAACTTCAGAGCCTTAGTGAACACTCAAAGCAGCATGAGCAAGATGAACCTCAGAAAACTGTTCATCGCTTCTTTGATGAATGGCCACATAAAGGGAGAGATCAATGGCTTGATTTGGATGATAAATCATCTACTACTCAATTATCAATTTCTATTCCATCCTCTACTCATGATTTTCCAACTTTCACTTCAAGAAATCACCAAGATGGTTGA 1086 0.3729 MNKNKFPFTPSQWQELEHQALIYKYMASGISIPPDLLFTIRKSYLDSPLSSRLFPSQQHQHFGWNYLQMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVAKTTTNTNINNASTLGISSLTKNSPASLTNSSSLSFETQQHHQNYPQNSCYGSNLQQSFMYPHTTSRSTLSSGIGLSFEDNSAPLFLDTNTCSQNNTDYRNRYVYGQKEEVDEYAFFKEPSGSSTMKSFSASSMEHDPWQLTPLTMSSSSLSSTSLRQRSFSALSNDYSCLQLQSLSEHSKQHEQDEPQKTVHRFFDEWPHKGRDQWLDLDDKSSTTQLSISIPSSTHDFPTFTSRNHQDG 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01816 361 PANTHER GROWTH-REGULATING FACTOR 5 7 349 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mepo6g01816 361 MobiDBLite consensus disorder prediction 119 169 - -
Mepo6g01816 361 MobiDBLite consensus disorder prediction 338 361 - -
Mepo6g01816 361 ProSiteProfiles QLQ domain profile. 7 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo6g01816 361 SMART QLQ_2 6 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo6g01816 361 MobiDBLite consensus disorder prediction 107 169 - -
Mepo6g01816 361 Pfam WRC 77 119 IPR014977 -
Mepo6g01816 361 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Mepo6g01816 361 Pfam QLQ 7 41 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01816 Mepo-Chr6 20677840 20680784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01816 7 119 GRF Transcription Factor Family AT3G13960 71.681 3.65e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mepo6g01816 WRC 7.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01816 - - gmx:100781613 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01816 6 20677840 20680784 Mepo6g01816 6 20677840 20680784 ECH
Mepo1g00495 1 4707315 4709545 Mepo6g01816 6 20677840 20680784 PCT