Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01803 ATGGTTGATGTTTTAAGCCCTTTCACAATCCCATCTCCTCCTCCACCACCTTCTTTATCAAACAAAAACAATAGCATACCCATGTTATATTATGGTCTAGTGGTGATGGGAATTGCAGCCATAGTCCTAGCAATATATAACATCATCATTATCAAACGTTGCAATAGGAGCCACAATCAATCACAACCCACAAGGCCAAATCTTATGGTTATTGAAGGATTTGAAAGAAGTAGTAATAGGAGCTTTGAAAACCAACAAAGAAATTTGCTTTCAAGCTTCAAGTACAAGAAGGAAGTGGTGGCAAAAGAACAAGAGCATAAAGGTTATGATTATGAATGCTATGTTTGCTTATCGGTTTATGAAGAAGGGGAAGATGTTAGGAAGCTACCAAAGTGTAAACATTGTTTTCATGCTCTTTGTATAGATATGTGGCTTTATTCTCACTTTGATTGCCCAATTTGTAGAACACCTGTTGGCCCTCTTTGTCATAATTTTCAAGAAGAGAATTATCGTGATGGGGTGATTGAATCTGGTGGTAGCATCTCTGTTTGA 552 0.3732 MVDVLSPFTIPSPPPPPSLSNKNNSIPMLYYGLVVMGIAAIVLAIYNIIIIKRCNRSHNQSQPTRPNLMVIEGFERSSNRSFENQQRNLLSSFKYKKEVVAKEQEHKGYDYECYVCLSVYEEGEDVRKLPKCKHCFHALCIDMWLYSHFDCPICRTPVGPLCHNFQEENYRDGVIESGGSISV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01803 183 CDD RING-H2_EL5-like 112 155 - -
Mepo6g01803 183 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 24 158 IPR044675 -
Mepo6g01803 183 FunFam RING-H2 finger protein ATL1 69 160 - -
Mepo6g01803 183 ProSiteProfiles Zinc finger RING-type profile. 113 155 IPR001841 -
Mepo6g01803 183 SUPERFAMILY RING/U-box 99 162 - -
Mepo6g01803 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 160 IPR013083 -
Mepo6g01803 183 Pfam Ring finger domain 112 155 IPR001841 -
Mepo6g01803 183 SMART ring_2 113 154 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01803 Mepo-Chr6 20497630 20498381 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01803 17 158 C3H Transcription Factor Family AT1G04360 33.775 4.06e-20 84.3