Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01800 ATGCTTACATGCATAGCACGTCCAAAGAAACTCGAAGAAGATTCAGAATCAAACAACAATGCAAAGAGCGTAAAATCTTTAACATGTCAGATAAAAGACATGGCATTGAAAGCTTCAGGTGTATACAAAAGCTGTAATCCGTGTACTCCTGCGACCCGCCTCCGAAACGGTGGCTCTGAGTCAGAAGTTTCTGACTCGGAGAAGTTTCGGAGGACGAGGACATGGGGGAAGGAGATGGAAGCTAGGTTGAAGGGGATATCAAGTGGAGAGGGAACACCGAGTTCGTCTTCGTCGTCGTTTGGGGGAGGAAGTGGGAGGAGAGTGGTTGTGCTTGAGGAGGAGGAAGGGAAGGAGTGGGTGGCGCAGGTGGAGCCTGGTGTTTTGATTACTTTTGTGTCTCTTCCAAGAGGTGGCAATGATCTCAAGCGGATACGGTTCAGTCGCGATATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGATAAGGTCATGGAGCTTTACAATGTTCAAAGGCTTAACCGCCAGGCCTTCCCGCTTCCAACTCCAGCAAGATCTGAAGACGAGAGTTCAAAGCGTGAATCAATAGCAGACAGCCCAGTGACACCTCCACTGACCAAGGAACAACTATCGCGCAATTTATACCGACCAACAGGAATGGGAATGGGATACTCATCCTCAGATTCCTATGATCAACACTCAATGCAATCCAAACACTATCAGTATGACTTAAGTGGTATGAACTCAACCCCAAAGGTTTCAACCATTAGTGCCGCTAAGACAGATATATCATCAGTAGCTGCTTCTATAAGAAGTAGCTCTTCTAGAGAAGCTGATCGCTCTGGTGATTTATCGATGAGCAATGCTAGTGATCCGGATAGTGAATGGGTTGAGGAAGATGAACCTGGTGTTTACATTACCATCAGGTCTATGCCAGGCGGCAAAAGGGAGATCAGAAGAGTCAGGTTCAGTCGAGAGAAATTTGGGGAGATGCATGCTAGACTATGGTGGGAAGAGAATCGCGCCAGAGTACATGCACAATACTTGTGA 1059 0.4674 MLTCIARPKKLEEDSESNNNAKSVKSLTCQIKDMALKASGVYKSCNPCTPATRLRNGGSESEVSDSEKFRRTRTWGKEMEARLKGISSGEGTPSSSSSSFGGGSGRRVVVLEEEEGKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSRDIFNKWQAQRWWAENYDKVMELYNVQRLNRQAFPLPTPARSEDESSKRESIADSPVTPPLTKEQLSRNLYRPTGMGMGYSSSDSYDQHSMQSKHYQYDLSGMNSTPKVSTISAAKTDISSVAASIRSSSSREADRSGDLSMSNASDPDSEWVEEDEPGVYITIRSMPGGKREIRRVRFSREKFGEMHARLWWEENRARVHAQYL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01800 352 MobiDBLite consensus disorder prediction 182 235 - -
Mepo6g01800 352 MobiDBLite consensus disorder prediction 51 71 - -
Mepo6g01800 352 MobiDBLite consensus disorder prediction 88 103 - -
Mepo6g01800 352 ProSiteProfiles BRX domain profile. 117 172 IPR013591 -
Mepo6g01800 352 MobiDBLite consensus disorder prediction 269 295 - -
Mepo6g01800 352 MobiDBLite consensus disorder prediction 84 104 - -
Mepo6g01800 352 MobiDBLite consensus disorder prediction 1 24 - -
Mepo6g01800 352 Coils Coil 352 352 - -
Mepo6g01800 352 Pfam Transcription factor regulating root and shoot growth via Pin3 297 351 IPR013591 -
Mepo6g01800 352 Pfam Transcription factor regulating root and shoot growth via Pin3 117 171 IPR013591 -
Mepo6g01800 352 ProSiteProfiles BRX domain profile. 297 352 IPR013591 -
Mepo6g01800 352 MobiDBLite consensus disorder prediction 269 301 - -
Mepo6g01800 352 Pfam Transcription factor BRX N-terminal domain 12 48 IPR027988 -
Mepo6g01800 352 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 352 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01800 Mepo-Chr6 20471869 20480144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01800 1 352 Major Intrinsic Protein MIP AT1G31880 43.490 2.93e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01800 - - gmx:100794109 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01800 6 20471869 20480144 Mepo6g01800 6 20471869 20480144 ECH