Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01784 ATGAAGAAAGGATGTTTAGCTCCAAATCTCAAACTCAATGTTCCTTCATCTAATCAAGCTTCTTTTGCAAAGTTTCTGACTCAAAGTGGTACTTTTAAAGAAGGGAACTTGCTTGTTAATAAAGATGGAGTTAGAATTGTTTCTCAAAGTGAAGTTGAAACTCAACCACCAATCAAGCCAATAGACAATCAGATAAGTTTGGCAGAGATTGATACAATCAAAGTGATTGGTAAAGGAAATGGAGGGATAGTCCAATTGGTGCAACACAAATGGACTAATCAGTTTTTTGCATTAAAGCAAATTCAAATGAATCTTGAGGATGCAACATGCAAGCAGATAGCAAAAGAGCTAAAAATCAATCAATCAGCACTATGTCCTTATGTGGTTGTTTGCTACCAATCAATCTATGATAATGGCACCATATCAATCATCTTAGAGTACATGGATGGAGGGTCCTTAGAGGATCTTCTCAACAAAGTTAAAACAATTCCAGAACCATTTCTTGCTGCAATTTGCAAACAGGTACTAAAGGGTTTGATGTATCTTCACCATGAGAAACACATTATTCATAGGGACTTGAAACCTTCGAATATACTGATAAATCATAGAGGGGAGGTGAAAATTACTGATTTTGGTGTAAGTGCAATCATGGAATCTACATCTGGTCAAGCAAATACTTTCATTGGTACATACAACTATATGTCTCCAGAAAGAATCAAAGCAAGCGATAGCGAACAAGGCTACAACTACAAAAGTGATATATGGAGCTTAGGACTGATGTTGCTCAAGTGTGCTACTGGGAAGTTTCCATATACACCACCAGATAACAGTGAAGGATGGGAAAATTTGTTTCTGCTTATTGAAGCAATTGTTGAAAAACCTTCACCTAGTGCTCCACCTGATGAATGTTCTCCTGAATTTTGCTCATTTATCTCAGCATGTTTACAGAAAAATCCGAGGGACAGACCATCAACTCGAAACCTATTGAGGCATCCTTTTGTCAACATGTATGATGACTTGCATGTGGATCTTTCAGATTATTTCTCCGATGCAGGATCTACACTTGCAACCATATCAAACTGA 1083 0.3721 MKKGCLAPNLKLNVPSSNQASFAKFLTQSGTFKEGNLLVNKDGVRIVSQSEVETQPPIKPIDNQISLAEIDTIKVIGKGNGGIVQLVQHKWTNQFFALKQIQMNLEDATCKQIAKELKINQSALCPYVVVCYQSIYDNGTISIILEYMDGGSLEDLLNKVKTIPEPFLAAICKQVLKGLMYLHHEKHIIHRDLKPSNILINHRGEVKITDFGVSAIMESTSGQANTFIGTYNYMSPERIKASDSEQGYNYKSDIWSLGLMLLKCATGKFPYTPPDNSEGWENLFLLIEAIVEKPSPSAPPDECSPEFCSFISACLQKNPRDRPSTRNLLRHPFVNMYDDLHVDLSDYFSDAGSTLATISN 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01784 360 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Mepo6g01784 360 FunFam Mitogen-activated protein kinase kinase 6 151 353 - -
Mepo6g01784 360 Gene3D Transferase(Phosphotransferase) domain 1 150 357 - -
Mepo6g01784 360 ProSiteProfiles Protein kinase domain profile. 70 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01784 360 SUPERFAMILY Protein kinase-like (PK-like) 72 341 IPR011009 -
Mepo6g01784 360 SMART serkin_6 70 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01784 360 Gene3D Phosphorylase Kinase; domain 1 44 149 - -
Mepo6g01784 360 Pfam Protein kinase domain 72 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01784 360 CDD PKc_MAPKK_plant_like 68 338 - -
Mepo6g01784 360 FunFam Mitogen-activated protein kinase kinase 1 52 149 - -
Mepo6g01784 360 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 13 338 - -
Mepo6g01784 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01784 Mepo-Chr6 20213943 20217595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01784 27 360 MAP Kinase Kinase Gene Family AT4G26070 64.072 7.87e-162 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Mepo6g01784 Pkinase 4.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01784 K20603 - gmx:100789734 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01784 6 20213943 20217595 Mepo6g01784 6 20213943 20217595 ECH
Mepo1g00475 1 4536640 4542418 Mepo6g01784 6 20213943 20217595 PCT