Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01773 ATGGAGAATAATCACATGGTGAAGGAGGAAATGGTAGATGAAGAAGAAGTGGTGGAACATGATGAGTTTGGTCTCATTGGTGGTGGTGAAGATGATGAAGATGTTGTTTCCACCTTGACTATGGAAAGGGTTGCTGCTGCTAAGAAATTCATTGAGAGTCATTATAAATCTCAAATGAAACACATTCAAGAACGCAAAGAAAGGCGTTCGGTGCTACAAAAGGAGCTAGAATCGTCGCATGTACCAGAAGAAGAACAGATCAATTTACTGAAGGATTTAGAGAGCAAGGAGACGGAGTATATGCGGCTAAAAAGACATAAAATATGTGTTGATGATTTTGACCTTCTAACCATTATTGGCAGGGGAGCTTTTGGTGAGGTAAGACTTTGCCGCGAGAAGAAATCCGGTAATATATATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTCAGCAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGGAATGTACTTGCAGAAGTTGCCAATGACTGCATTGTGAAACTTTATTACTCATTTCAAGATCCTGAATTCTTATATCTTATAATGGAATATTTACCTGGTGGCGATATAATGACTTTGTTGATGAGGGAAGAAACTTTGACAGAAAGTGTGGCAAGATTTTACATCGCCCAAACCGTTTTGGCCATTGAGTCTATTCATAAACACAATTACGTTCATCGGGATATAAAACCTGACAACCTTCTCTTAGACATAAATGGTCATATGAAATTGTCGGATTTCGGTCTTTGCAAACCACTTGAAGTCTCAAATCTATCACCTATAAGTGAAAAGGAAATATTGGATGATGATAACTTGAATGATACAATGGACGTTGATGGAAATTGCCCGAATAGCAGAAATGGTAGGCGTTGGAAAAGTCCTCTCGAACAACTTCAACATTGGCAAATGAATAGGAGGAAGTTGGCATTTTCCACTGTTGGAACTCCAGATTATATTGCTCCGGAAGTGTTACTGAAAAAGGGTTATGGCGTGGAGTGCGACTGGTGGTCTCTTGGCGCTATAATGTATGAAATGCTTGTTGGTTATCCTCCATTTTACTCTGATGATCCTGTAACAACATGCAGAAAGATTGTCCACTGGAAAAACCACTTAAAATATCCAGAGGAGGCAAGATTGACACCTGAAGCGAAAGATCTGATGTACAAGTTGCTTTCTGGTGTTCCACATAGGCTTGGAACCAGAGGAGCAAAAGAAATTAAAGATCATCCTTGGTTTAGGGATGTCCTATGGGATAGGCTCTATGAAACTGAGGCTGCATTTAAACCACGAGTCGTAGGGGAACTTGATACTCAGAATTTTATGAAATTCGATGAGGTTGAACAACCAATGCCAGCTCGATCTGGATCCGGACCCATCAGAAAGACGCTCTTAACTCCTCAAGATCTCAGTTTTGTTGGCTATACATATAAGAATTTTGCCGCTGTCAAGGGGAAGCGTCATTCTATTGATTCAATCTCTGTGGTTTTGAATTTGTAA 1521 0.4004 MENNHMVKEEMVDEEEVVEHDEFGLIGGGEDDEDVVSTLTMERVAAAKKFIESHYKSQMKHIQERKERRSVLQKELESSHVPEEEQINLLKDLESKETEYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNVLAEVANDCIVKLYYSFQDPEFLYLIMEYLPGGDIMTLLMREETLTESVARFYIAQTVLAIESIHKHNYVHRDIKPDNLLLDINGHMKLSDFGLCKPLEVSNLSPISEKEILDDDNLNDTMDVDGNCPNSRNGRRWKSPLEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKNHLKYPEEARLTPEAKDLMYKLLSGVPHRLGTRGAKEIKDHPWFRDVLWDRLYETEAAFKPRVVGELDTQNFMKFDEVEQPMPARSGSGPIRKTLLTPQDLSFVGYTYKNFAAVKGKRHSIDSISVVLNL 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01773 506 Pfam Protein kinase domain 115 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01773 506 Pfam Protein kinase domain 312 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01773 506 Gene3D Phosphorylase Kinase; domain 1 103 198 - -
Mepo6g01773 506 SMART pkinase_C_6 421 486 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mepo6g01773 506 CDD STKc_NDR_like 111 485 - -
Mepo6g01773 506 ProSiteProfiles AGC-kinase C-terminal domain profile. 421 494 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mepo6g01773 506 SUPERFAMILY Protein kinase-like (PK-like) 95 467 IPR011009 -
Mepo6g01773 506 CDD MobB_NDR_LATS-like 47 108 - -
Mepo6g01773 506 Gene3D Transferase(Phosphotransferase) domain 1 199 437 - -
Mepo6g01773 506 SMART serkin_6 113 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01773 506 FunFam Non-specific serine/threonine protein kinase 74 196 - -
Mepo6g01773 506 FunFam Non-specific serine/threonine protein kinase 319 438 - -
Mepo6g01773 506 FunFam Non-specific serine/threonine protein kinase 197 264 - -
Mepo6g01773 506 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 454 - -
Mepo6g01773 506 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Mepo6g01773 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Mepo6g01773 506 ProSiteProfiles Protein kinase domain profile. 113 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01773 Mepo-Chr6 19981460 19986116 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01773 10 498 AGC Kinase Gene Family AT2G19400 73.320 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Mepo6g01773 Pkinase 7.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01773 K08790 - gmx:100802177 830.091