Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01754 ATGATGTACTTGAGAAGTAGTGGATTCTCTGAATATTCAAACGAAATCAGCAACAACACTGGCAGTGCCAGTGAGTTATGCTGCACAACAGCACCAAATTCAACTATTACTACTTCACAAGATATCATCACAATCACACAACCACTCAACCGTCTCTCAGACAATTTAGCTTCCATAATAAATGATACAGGGTTTGACTTCTTTTCCGACGCAAAGATCATTGCCGGAGATGGTCGAGAAGTTTCAGTGCACCGGTGCATTTTGTCGGCTAGGAGTAGTTTCTTTAAGGATGTGTTTAAGGGAAAGAAAGAAACGACGCTGCAACTGAAGGAAGTGGCTAAGGATTATGATGTTGGGTTTGAAGCGCTTAACGTTGTTCTGCGTTATTTGTATAGTGGGAGAGTTGATGATCATCATTTGTCTGCTAAAGATGTTTGTATTTGTGTGGATGATCATTGTTTACACTTTGATTGTTGGCCAGTTGTAGATTTCATGCTTCAACTTCTCTATGCTTCTTTCACCTTTCAAATTTCTGAACTGGTTGCTCTTTATCAGGATCATCTACTAGACATTCTTGACAAAATGTCAATAGATGACATGTTGATGGTTCTTTCTATAGCAAACATTTGTGGTAAAACTTGTGACAAACTACTATCAAGATGTACAGAGATAATAGTTGAATCTAATGTTGATATAACCACTCTTGAAAAATCACTGCCTCAACCTATAGTGAAACAAGTAACATACAAACGCAAACAACTCGGCTTAGACATGTATGAAACCGTAAATCTTCTAGACAAACATGTCACCAGAATACACAGAGCTTTAGATTCAGATGATGTAGAATTAGTAAGGTTGCTTTTGAAAGAAGGACACACTACTCTAGATGAGGCTTATGCACTTCACTATGCTGTTGCATATTGTGATGTCAAAACCACTACCGAGCTTCTTGATCTTGGACTTGCCGATGTAAATCGTAAAAATCTTAGGGGCTACAGCGTGCTACATGTTGCTGCGAAGAGAAAAGAACCGAAGATTATTGTATCTTTGTTAACGAAGGGAGCTCAACCTTCTGAACTCACTATGGATGGCAGAAAAGCTCTTCACATGTCAAAGCGTTGTACGAAAGCTGTGGATTATTATAAATCTACTGAGGAAGGAAAGGTTTCTTCGAATGATCGGTTGTGTATAGAGATATTAGAGCAAGCTGAGAGAAGGGAGCCTTTACATGGGGAGGCATCGCTTTCTCTTGCTAAGGCAGGGGATGATTTGCGTATGAAATTGTTGTACCTAGAAAACCGAGTTGGACTAGCAAAACTTTTGTTTCCCATGGAAGCAAAGGTTGTGATGGATATCACTCCAATTGATGGCACATCTGAATTTACTCCAAATTTGGGTGGTTACCAGAGGACAACTATGGACTTGAATGAGACACCTTTTAAAATAAAAGAGGAGCATCTAATTCGGATGAAGGCACTGTCTAGAGCAGTGGAGTTGGGGAAACGTTTCTTCCCTCGTTGCTCGGAAGCGTTGAACAAGATCATGGATGCCGATGACCTATCGCAGCTTGCATGCATGGGTCATGACAGTCCTGAAGATCGACTAGTGAAGCGCAGACGATACGCGGAGCTACAAGAAGTTCTTAATAAGGTTTTCCATGAAGACAAAGAGGAGTTTGATAAATCTGGCATGTCTTCATCATCCTCATCCACGTCAATAGGAATGCCAAGGGCTAATAATAGTATGATAGCAATGAATCATTGA 1764 0.4025 MMYLRSSGFSEYSNEISNNTGSASELCCTTAPNSTITTSQDIITITQPLNRLSDNLASIINDTGFDFFSDAKIIAGDGREVSVHRCILSARSSFFKDVFKGKKETTLQLKEVAKDYDVGFEALNVVLRYLYSGRVDDHHLSAKDVCICVDDHCLHFDCWPVVDFMLQLLYASFTFQISELVALYQDHLLDILDKMSIDDMLMVLSIANICGKTCDKLLSRCTEIIVESNVDITTLEKSLPQPIVKQVTYKRKQLGLDMYETVNLLDKHVTRIHRALDSDDVELVRLLLKEGHTTLDEAYALHYAVAYCDVKTTTELLDLGLADVNRKNLRGYSVLHVAAKRKEPKIIVSLLTKGAQPSELTMDGRKALHMSKRCTKAVDYYKSTEEGKVSSNDRLCIEILEQAERREPLHGEASLSLAKAGDDLRMKLLYLENRVGLAKLLFPMEAKVVMDITPIDGTSEFTPNLGGYQRTTMDLNETPFKIKEEHLIRMKALSRAVELGKRFFPRCSEALNKIMDADDLSQLACMGHDSPEDRLVKRRRYAELQEVLNKVFHEDKEEFDKSGMSSSSSSTSIGMPRANNSMIAMNH 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01754 587 SMART BTB_4 69 192 IPR000210 GO:0005515
Mepo6g01754 587 Pfam NPR1/NIM1 like defence protein C terminal 372 571 IPR021094 -
Mepo6g01754 587 ProSiteProfiles BTB domain profile. 69 139 IPR000210 GO:0005515
Mepo6g01754 587 Pfam BTB/POZ domain 67 144 IPR000210 GO:0005515
Mepo6g01754 587 SMART ANK_2a 267 295 IPR002110 GO:0005515
Mepo6g01754 587 SMART ANK_2a 296 326 IPR002110 GO:0005515
Mepo6g01754 587 SMART ANK_2a 330 359 IPR002110 GO:0005515
Mepo6g01754 587 ProSiteProfiles Ankyrin repeat profile. 330 362 IPR002110 GO:0005515
Mepo6g01754 587 PANTHER REGULATORY PROTEIN NPR3 13 573 IPR044292 GO:0009862|GO:2000022|GO:2000031
Mepo6g01754 587 SUPERFAMILY Ankyrin repeat 261 373 IPR036770 -
Mepo6g01754 587 CDD BTB_POZ_NPR_plant 50 192 - -
Mepo6g01754 587 Pfam Ankyrin repeats (many copies) 300 344 IPR002110 GO:0005515
Mepo6g01754 587 SUPERFAMILY POZ domain 46 190 IPR011333 -
Mepo6g01754 587 MobiDBLite consensus disorder prediction 563 587 - -
Mepo6g01754 587 ProSiteProfiles Ankyrin repeat region circular profile. 330 356 - -
Mepo6g01754 587 FunFam BTB/POZ domain and ankyrin repeat-containing protein NPR1 241 394 - -
Mepo6g01754 587 MobiDBLite consensus disorder prediction 558 587 - -
Mepo6g01754 587 Gene3D - 224 449 IPR036770 -
Mepo6g01754 587 Gene3D Potassium Channel Kv1.1; Chain A 32 223 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01754 Mepo-Chr6 19741114 19744124 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mepo6g01754 NPR1_like_C 4.7e-84 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01754 K14508 - gmx:100800032 796.578