Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01752 ATGTTAAAATACTTAGGATCTGCAGCCGACAAGGTGATCCGTTTACCAGACCAGCCTGAGGTTGACTTCCAACAGTATTCTGGCTACATTACTGTTGATGAAGTCAACCAAAGGAGCCTCTTCTACTATTTTGTAGAATCTGAGGTTGATGTTGCATCAAAACCTGCAGTCCTATGGTTAAATGGAGGACCTAGCTGTTCTTCTATTTGCCAAGGAGCATTTGCTGAACATGGTCCTTTCAAGCCCACCAGAAAAGGTGGTCTAGTTAAAAATCGGTACAGCTGGAACCAAGTGGCCAATATGTTGTATTTGGAGTCCCCTGCAGGTGTTGGCTTCTCTTACTCGGCCAATACCTATGATTATTTCATGGTGACCGATGAGAGGACAGCAAGGGATGCCCTTGTTTTCCTCCAAGAGTCTCTATTAAAGGGGTTGGCCAAGGATATTGGTCTGGACATTAGTGACCACTATAGGTCCTGGTTTGATGGACGACAGGTTGCTGGATGGACTGAAACTTATGGGGACATCCTCACCTTCGCAACAATTAGAGGAGCGGGTCATGCAGCCCCAACTTCTCAACCAGGGAGGTCCCTCCGGCTCTTTAAGAGTTTTATAGAAGCAAAACCACTTCCAGGAAACGTAACTGTTCCATTTTAG 657 0.4581 MLKYLGSAADKVIRLPDQPEVDFQQYSGYITVDEVNQRSLFYYFVESEVDVASKPAVLWLNGGPSCSSICQGAFAEHGPFKPTRKGGLVKNRYSWNQVANMLYLESPAGVGFSYSANTYDYFMVTDERTARDALVFLQESLLKGLAKDIGLDISDHYRSWFDGRQVAGWTETYGDILTFATIRGAGHAAPTSQPGRSLRLFKSFIEAKPLPGNVTVPF 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01752 218 ProSitePatterns Serine carboxypeptidases, histidine active site. 177 194 IPR033124 GO:0004185
Mepo6g01752 218 Pfam Serine carboxypeptidase 149 206 IPR001563 GO:0004185|GO:0006508
Mepo6g01752 218 Pfam Serine carboxypeptidase 19 139 IPR001563 GO:0004185|GO:0006508
Mepo6g01752 218 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 140 IPR001563 GO:0004185|GO:0006508
Mepo6g01752 218 SUPERFAMILY alpha/beta-Hydrolases 8 139 IPR029058 -
Mepo6g01752 218 PRINTS Carboxypeptidase C serine protease (S10) family signature 91 103 IPR001563 GO:0004185|GO:0006508
Mepo6g01752 218 PRINTS Carboxypeptidase C serine protease (S10) family signature 104 114 IPR001563 GO:0004185|GO:0006508
Mepo6g01752 218 Gene3D alpha/beta hydrolase 6 143 IPR029058 -
Mepo6g01752 218 Gene3D alpha/beta hydrolase 144 211 IPR029058 -
Mepo6g01752 218 SUPERFAMILY alpha/beta-Hydrolases 148 213 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01752 Mepo-Chr6 19731163 19733303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01752 147 210 Calmodulin-binding Proteins AT2G22960 37.500 2.82e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01752 K16297 - pop:18099806 194.126