Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01742 ATGAACAGGAAAGCAAGCAAATACTCCATCTGTCTCATATTATGTGACCTAGTTGACTCTGTCACTCGTTTGTCCTTCTTGGATGGTTTCTACAATGTGATAAACGATCAATTACCAAGTTCTTCTTTGGGGAGTGTAGCACAACAGCTTTTTAATCAGTACAGGATTTTATCATTTGATGTCAATGATGACCGTGTTCCTGGATTAGCTTTTAGGAATCAACGTCCCTACTTAGAGCTGCAACAATTGGAACTTCTTACACTGTCATCTACAGAAATACAGACACAATTCTACCAGGAAGCAAGGATCAAGACTGTTGTTTTCATGGGGTGCAACAAAGGAGAAATTGAGCTGGGTTTCTTAAATATGTCTCAAGTGGATATTCAAACGGCACTTAGCAGTTTATTTCCTGAAGATTTTTCAAGACAGACACAACAAATTAATCATAATCCACCTTCATCATCTTCATCTTCAATGAGATCACTATCAACAGCAGGTAGTCCTGAATACTCATCTCTCATATTCAACACAAATCCACCTGGAACTTCTCCACCCCAATTTTCACCTGATCCTACCCATCTTGGAGTAAATATTCCACCAATGAGACCTGTTTCAAACACACTACTACCCCTTCAACTTCAACAATTACCTCAAATCACACCAACACAATTATTCCCTACAACACAAATTGAGAATGATGTGATAATGAGAGCAATTCAAAATGTTCTATCTACACCCCCTTCTCATCAACACCAACCTCAGCAAAATTATGTGGCACATCCGGAAGCTAGTGCATTTGGAAGGTATAGACATGATAAAAGTCCTAATATAGGCTCAAATTTTAGAAGACAGAGTTTGATGAAGAGATCATTTGCATTCTTTAGAAGCTTGAATTTGATGAGAATGAGAGATCGTAATCAAGCGGCGCGCCCCTCGAGTAATCAACTTCATCATATGATATCAGAGCGACGAAGACGAGAGAAGCTTAATGAGAATTTTCAAGCACTTAGAGCATTACTTCCTCAAGGAACTAAGAAAGACAAAGCTTCCATACTAATAACAGCAAAGGAGACATTGAGATCTTTGATGGCTGAAATTGACAAACTAAGCAGAAGAAATCAGGAGTTGATGTCTCAACAATTGCCAGCAGCAAATAAAGAATCTACAAAACCTAAAGAAATTATCAAACTCTCATCATATGAAAGATTAAACGTGCGAGTTTCGCACGTAACGGGGTCAAGTTCTTCAGAAGATGAATCAATGGTAGTGGACTTGCAAGTGAACGTGATGGGACAAATTTCTCAAGTTGATGTATTGATTCGATTATTGGAATTCTTGAATCAAGATCAACATGTCAACTTGGTTTCAATGGATGCAACAAATACAAATCATGCACCAGGGAATGATTTACTTCATCAAATAACCTTCAGGCTAAGGATTACTCAGATAAGTGAATGGGACGAGGAAGCCTTCCAGGAAGCAGTGAGAAGAGTGGTTGCTGACTTGATACAGTCCCAAGTGGACCAAAATATATGA 1536 0.3854 MNRKASKYSICLILCDLVDSVTRLSFLDGFYNVINDQLPSSSLGSVAQQLFNQYRILSFDVNDDRVPGLAFRNQRPYLELQQLELLTLSSTEIQTQFYQEARIKTVVFMGCNKGEIELGFLNMSQVDIQTALSSLFPEDFSRQTQQINHNPPSSSSSSMRSLSTAGSPEYSSLIFNTNPPGTSPPQFSPDPTHLGVNIPPMRPVSNTLLPLQLQQLPQITPTQLFPTTQIENDVIMRAIQNVLSTPPSHQHQPQQNYVAHPEASAFGRYRHDKSPNIGSNFRRQSLMKRSFAFFRSLNLMRMRDRNQAARPSSNQLHHMISERRRREKLNENFQALRALLPQGTKKDKASILITAKETLRSLMAEIDKLSRRNQELMSQQLPAANKESTKPKEIIKLSSYERLNVRVSHVTGSSSSEDESMVVDLQVNVMGQISQVDVLIRLLEFLNQDQHVNLVSMDATNTNHAPGNDLLHQITFRLRITQISEWDEEAFQEAVRRVVADLIQSQVDQNI 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01742 511 MobiDBLite consensus disorder prediction 143 181 - -
Mepo6g01742 511 Coils Coil 352 379 - -
Mepo6g01742 511 Pfam Helix-loop-helix DNA-binding domain 317 362 IPR011598 GO:0046983
Mepo6g01742 511 CDD bHLH_AtbHLH_like 318 370 IPR045239 -
Mepo6g01742 511 Gene3D - 312 385 IPR036638 GO:0046983
Mepo6g01742 511 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 90 501 IPR044658 -
Mepo6g01742 511 MobiDBLite consensus disorder prediction 143 193 - -
Mepo6g01742 511 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 311 381 IPR036638 GO:0046983
Mepo6g01742 511 Coils Coil 319 339 - -
Mepo6g01742 511 SMART finulus 319 368 IPR011598 GO:0046983
Mepo6g01742 511 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 313 362 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01742 11 502 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 39.354 2.31e-82 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo6g01742 HLH 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01742 - - gmx:100807098 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01742 6 19611958 19618375 Mepo6g01742 6 19611958 19618375 ECH