Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01740 ATGAGTCCTTCCAGAATCTTTTTCTTCTTTTTTTTCTTCTGCTTCTTCTTTAGAACTTCCTCTTCCGATATATTAGATACCATCACACAGAAAGGAAAATTTCCGTCTTGGGTTAAACCAGGTGATAGGAAGCTTCTACAGGCGAGTGTGGTGCCTGCAGATGTCGTGGTAGCATCTGATGGGAGTGGAAACTATATGAAGATTATGGATGCTGTGATGGCAGCACCTAACGGAAGCAAGAAGCGCTATGTAATACACATCAAGAAAGGTGTTTACAATGAGCATGTTATGATCAACAATAGCAAGTCCAAGCTCATGATGATCGGAGATGGTATGTGTGCCACTGTCATCACCGGTGACTTAAGCTGGGGGAGAGATAAGTTAGACACATCCTATACTTATACCTTTGTTGTTGAGGATCCAGGTTTCATTGCTCAGGACATTTCCTTCAGGAACACCACAGGGCCTGAAAATCATTATGCAGTGGCACTATTGTCAGATTCAGACACCTCTGTCTTTTACCGATGTGAAATCTCTGGTTTTCAAGACAGTTTGTCTGCCGTCTTTCAAGACTGTGACATATTGGTAAGGAAAGGACTAACAGGCCAACAGAACACCATCACTGCTCAAGGAGGACCAGAAAAACCTAATCTACCATTTGGTTTCGCGTTTCAGTTCTGCAACGTCTCTGCTGATCCTGAATTTCTTCCTTTCGTCAAATCTACCCAAACATTCCTCGGAAGACCGTGGAAGCCTTACTCACGAGTAGCATTCATGCAGTCCTATATCAGTGACGTGTTGAGCCCCAAATGCTGGCTAGAGTGGAACAATACTGCAGTTTATTTGGACACATTGTCCTATGCTGAGTACAATAATCATGGACCTGGAGTTGCAGTTCAGAACCGCGTGAAATGGTCAGGGTACCATGCAGGGTCGGCCTAA 942 0.4406 MSPSRIFFFFFFFCFFFRTSSSDILDTITQKGKFPSWVKPGDRKLLQASVVPADVVVASDGSGNYMKIMDAVMAAPNGSKKRYVIHIKKGVYNEHVMINNSKSKLMMIGDGMCATVITGDLSWGRDKLDTSYTYTFVVEDPGFIAQDISFRNTTGPENHYAVALLSDSDTSVFYRCEISGFQDSLSAVFQDCDILVRKGLTGQQNTITAQGGPEKPNLPFGFAFQFCNVSADPEFLPFVKSTQTFLGRPWKPYSRVAFMQSYISDVLSPKCWLEWNNTAVYLDTLSYAEYNNHGPGVAVQNRVKWSGYHAGSA 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01740 313 Pfam Pectinesterase 187 310 IPR000070 GO:0030599|GO:0042545
Mepo6g01740 313 Pfam Pectinesterase 54 185 IPR000070 GO:0030599|GO:0042545
Mepo6g01740 313 SUPERFAMILY Pectin lyase-like 49 309 IPR011050 -
Mepo6g01740 313 Gene3D - 186 313 IPR012334 -
Mepo6g01740 313 Gene3D - 51 185 IPR012334 -
Mepo6g01740 313 PANTHER PECTINESTERASE 22 186 - -
Mepo6g01740 313 ProSitePatterns Pectinesterase signature 1. 79 98 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01740 Mepo-Chr6 19582979 19584102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01740 33 309 Carbohydrate Esterase AT3G43270 52.145 2.42e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01740 K01051 - qsu:112004696 328.946