Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01706 ATGTTCTTTGTCCTTGGAGGGATAGTAGTGGTCACCATAATATTGATTCTTGGTTGGATTGTATTTAGAAAACGTGTGAAACGATCACCAAATCCAGTGGGAAAGACAGTTCCAAATGAAGCTGAACCTACAGAGGTGATGAAGGCGATATTTCCATCCAAACAACAATCATCAGGGTCAATGGAGTTCTTTAGTGGGAGCCTTCGGTCTATTAGCTACTTTGATTACCAGACATTGAGGAAGGCAACCAATAACTTTTTTCATGGAAATCTTCTTGGAAGTGGTGGATTTGGACCTGTATATAAGGGAAAGTTGGAAGATGGAAGGATCATTGCTGTTAAGGCATTGTCTCTTAACAAATCTCAACAAGGAGAAAGAGAATTTTTGGCTGAGGTTAAATTGATCACAAGTATCCAACACAAAAATTTGGTTCGCCTTCTTGGAAGTTGTATAGATGGTCCTCAAAGAATACTTATTTATGAATACATGAAAAACCGAAGTTTGGATCTCTTCATATATGGAAACAATGATCGATTTTTGAATTGGAGCACTAGGTATCAAATCATACTTGGAGTAGCACGTGGACTTCAATACCTTCACGAAGATTCACATCTAAGAATTGTTCATAGGGATATCAAAGCAAGCAACATTCTTCTTGATGACAAGTTTTTGCCTAGAATTGGTGACTTTGGGCTAGCAAGATTTTTTCCAGAAGACCAAGCTTATCTTAGCACACAGTTTGCAGGAACATTAGGATATACAGCTCCTGAATATGCTATTAGAGGGGAATTGTCAGAAAAGGCTGATATCTATAGTTTTGGAGTTCTCCTTCTTGAAATTATATGTTGCAGGAAAAATACAGATCATACTTTACCACCAGATATGCAGTACCTCCCTGAATATGCATGGAAATTATACGAGAAATCAAGTTTATTAGATCTTGTTGATCCAAAGCTGAAACAAGATGGATTTGTGGAAAAGGATGTTATGCAAGCAACTCATGTGGCTCTCTTATGCCTTCAACCTCATGCACATTTGAGACCACCAATGTCAGAAATTGTGGCATTGTTGACATTCAAAATTGAAATGGTCACAACACCAATGAGACCAGCCTTCCTTGACCGAAGGCCAAGGAAGGACGAAGATAATCATTCTTTTGAAGTAACATCTATGGCAAGCCACTAA 1185 0.3823 MFFVLGGIVVVTIILILGWIVFRKRVKRSPNPVGKTVPNEAEPTEVMKAIFPSKQQSSGSMEFFSGSLRSISYFDYQTLRKATNNFFHGNLLGSGGFGPVYKGKLEDGRIIAVKALSLNKSQQGEREFLAEVKLITSIQHKNLVRLLGSCIDGPQRILIYEYMKNRSLDLFIYGNNDRFLNWSTRYQIILGVARGLQYLHEDSHLRIVHRDIKASNILLDDKFLPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLLLEIICCRKNTDHTLPPDMQYLPEYAWKLYEKSSLLDLVDPKLKQDGFVEKDVMQATHVALLCLQPHAHLRPPMSEIVALLTFKIEMVTTPMRPAFLDRRPRKDEDNHSFEVTSMASH 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01706 394 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 18 385 - -
Mepo6g01706 394 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 163 367 - -
Mepo6g01706 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Mepo6g01706 394 MobiDBLite consensus disorder prediction 373 394 - -
Mepo6g01706 394 CDD STKc_IRAK 92 358 - -
Mepo6g01706 394 MobiDBLite consensus disorder prediction 373 387 - -
Mepo6g01706 394 Gene3D Phosphorylase Kinase; domain 1 47 162 - -
Mepo6g01706 394 SUPERFAMILY Protein kinase-like (PK-like) 61 360 IPR011009 -
Mepo6g01706 394 ProSiteProfiles Protein kinase domain profile. 86 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01706 394 FunFam Cysteine-rich receptor-like protein kinase 10 50 162 - -
Mepo6g01706 394 Gene3D Transferase(Phosphotransferase) domain 1 163 366 - -
Mepo6g01706 394 Pfam Protein tyrosine and serine/threonine kinase 90 355 IPR001245 GO:0004672|GO:0006468
Mepo6g01706 394 SMART serkin_6 86 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01706 Mepo-Chr6 19179792 19185316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01706 74 386 Receptor kinase-like Gene Family AT1G56120 47.923 9.71e-101 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo6g01706 PK_Tyr_Ser-Thr 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01706 - - cam:101498319 608.216