Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01705 ATGGATGATGATCATCACATGGCATGCACGTTGGATCTTAATCTTAAACTTGGATTAGGAAGTTATGTGCAAAACAATGTGAACAAACCACTGGTTGATTCAAAAGAAGAATTGGCCATTGATTTGAACCATGATAGGGCAAATGAATTGAGTTTGAAGAGAGTGCATGAAGAAGAACAAGCAAACACAGTTGAAGAAGAAATTGCTATTGACACCACCAATGACAACAACGGGTGCACAAAGAAATTGAGGCTTACAACTGAGCAATCAACCAAGCTTGAAAATGCTTTCAAGCGTCACAACACAATTAACACCGCTCAAAAACGGGCACTTGCAGAGGAATTGAATTTAAAGCAAAGACAGGTTGAAGTTTGGTTCCAGAACAGAAGAGCAAGGACTAAGCTGAAACAAACAGAGGTGAACTGTATATACTTGAGGAAATGTCATGAGAAACTAAGTGAGGAGAATCTTAGGTTGAAGAAGGAATTAGAAGAACTGCGTGCATTAAAAGTTGGACCATCAAATACAACTCAATCATCTAAAGCTGCAAATTGGACCATTTGTTCATCATGCAAGAAAATATGGAAGCCCAATGAGGAGGATGTTGTTATTAAGAGCAGCCACAGCACCATAGAGTTAGATTAA 645 0.386 MDDDHHMACTLDLNLKLGLGSYVQNNVNKPLVDSKEELAIDLNHDRANELSLKRVHEEEQANTVEEEIAIDTTNDNNGCTKKLRLTTEQSTKLENAFKRHNTINTAQKRALAEELNLKQRQVEVWFQNRRARTKLKQTEVNCIYLRKCHEKLSEENLRLKKELEELRALKVGPSNTTQSSKAANWTICSSCKKIWKPNEEDVVIKSSHSTIELD 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01705 214 Coils Coil 149 169 - -
Mepo6g01705 214 ProSitePatterns 'Homeobox' domain signature. 111 134 IPR017970 GO:0000981|GO:0006355
Mepo6g01705 214 SMART halz 136 179 IPR003106 GO:0006355|GO:0043565
Mepo6g01705 214 Coils Coil 47 67 - -
Mepo6g01705 214 SUPERFAMILY Homeodomain-like 74 137 IPR009057 -
Mepo6g01705 214 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 33 198 - -
Mepo6g01705 214 Pfam Homeodomain 82 134 IPR001356 GO:0003677
Mepo6g01705 214 CDD homeodomain 81 137 IPR001356 GO:0003677
Mepo6g01705 214 ProSiteProfiles 'Homeobox' domain profile. 76 136 IPR001356 GO:0003677
Mepo6g01705 214 SMART HOX_1 78 140 IPR001356 GO:0003677
Mepo6g01705 214 Gene3D - 86 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01705 Mepo-Chr6 19160364 19162118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01705 71 198 Homeobox Transcription Factor Family AT4G17460 56.923 2.54e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mepo6g01705 Homeodomain 4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01705 K09338 - gmx:100790522 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00428 1 4122671 4124071 Mepo6g01705 6 19160364 19162118 PCT