Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01677 ATGCGGGATACTGAGAAGTTAAATAACACAGGATCTACAAAACTGAGTAACCCAAAGGAACATATCAAGTTGAAGGTAGATTCCCCGCAGTTCAAAACAAGTAGCGCAAAGCACCAAAGGAAGAAACACAGACTGAAATCAAAATCTCATAAACTCGGAGGTTGCACAAATGTGTCAGTGAAGACAGCTACTGATTCTTCCAACAAGGCGCCAACCAAGGATTCTTCAAATAAAAGTTTGATTGTTAGACAAAGTCTACATAAAACGGATAGGAATACAACTTCAAAAAAGATACAAGGAGGAAAAACTTCTCTTAATAATGATAGGAAAGGTGAGAAAGATGTTGATCAAGAGACAAATATTCAAAAACGTAAGAGAAGGAGAAAGAAGAAAAGACAAAGACATGATGTAGATCTTGATGATACTGTACGCCTCCAGAGAAGAACAAGGAATATCTTAATCAGAATGAAGCAAGAGCAGAACCTTATAGATGCTTACGCTGGAGAAGGTTGGAAAGGTCAGAGTCGAGAGAAGATTAGGCCAGAAAAGGAGCTTCAAAGAGCAAAAAAGCAGATTTTAAAATGCAAGCTTAGTATCCGTGATGCCATTCACCAACTGGATTCTCTTAGTTCAGTTGGTAGTATTGAAGGTTCTGTCATTGCTACAGATGGATCTGTTTCTCATGAACATATATTCTGTGCAAATTGCAAGATAAACGAAGTTTCTCCAGATAATGATATTATACTCTGTGATGGCACATGCAATCGTGCGTTTCACCAGAGATGTCTTGATCCTCCTTTGGAGACTGAAGACATTCCTCCTGAAGACCAAGGCTGGTTTTGCAAGTATTGTGACTGTAAGATAGAAATATTGGAGGCAACAAACGCGCATCTTGGGACTCGTTTCCCCTTAGACAGTACTTGGCAGGATGTATTCAAGGAAGAAGCTGCTATTCCTGACGGCGATGCTGCATTACTAAATCAAGAAGAAGAATGGCCGTCAGATGATCCTGAAGACGATGACTATAATCCAGAGAGGAAAGAAGAAAGCCATGGTGGCATCAACACAGAAGGAAATGATGAAGACGCATCTAATGATTCGAGTAGTTCTTCCAGCATGTGGTCTTTAAATGGAGAATGTTCTCTGTTAGATGAAGGCATCAACCTTGAATATTATTCTAACCACCACATAGATTCTGATGAATCCGGGGAAATAGCATGCGGTCGTAGGCAGCGTAGAGCTGTTGACTACAAGAAACTTTATGATGAAATGTTTGGAAAGGATGCTCCACCTTGTGAACAAGTGAGCGAAGATGAAGATTGGGGTCCTGGAAAAAGACGGCGAAGAGAAAAGGAGTCTGAGGCTGTTAATACTCTTATGACTCTACATGAGAGTGAAAATAAATATCCGAATAATAAGAGCAATGATAGAATAAGAGGGAATTCTTCAGGCATAAAAAGACCTTGTTTTAGGTTTTCACATGAGGCAGTTGAGAAGCTTCGCCAAGTTTTTGCAGAGAATGAGCTTCCTCCAAAATCCGTGAAGGATGCCCTTTCGAAAGAATTGGGACTTGATGCTGCAAAGGTTAACAAATGGTTCAAAAATGCACGTTACATGGCACTTAAAATGAGAAAGCTTCAAGAAGGAGGACAACAGCTTCAGAGTATCACTTCTAAGACCTCAAAGGATTCTACATCACAACATGTGCAGGAAGATGAAGTTTTAAACCCGAAGGTCGCGAAAATTACTGGGATTCGGCCCTTGAAGAAGTGTGAAAATGTTACTGGCAAAGAAAAAACAAAAGCATCTAGCAGTCCTTTGAAGAAAAAGCGACCAGAAATACCTCCACGCTTGGGAGAAAATGGCAACAAGGATTCCATGGAGGTCAGTGATGATGTTAGCTTAATGAAACTATTGCAAGAAAGGAAAAAGAAGGTAAGTTTTGTATTTGAAGGAGACTCCGAGGCAGCAGAGTTGGAATTTGAAAGACTCAGCAAAGTGAAGTCGAAAATAGATAGATTGAAGCAAAGATTAACTGGAGTTCAAAATTGCAGATCAAAGGGTTCAGATGAAGTTCATTTGAATGAGCCATCTATTATGTATGTGCCTATAGCTGAGTTAAGGGAAAAGGTGAAATAG 2139 0.3988 MRDTEKLNNTGSTKLSNPKEHIKLKVDSPQFKTSSAKHQRKKHRLKSKSHKLGGCTNVSVKTATDSSNKAPTKDSSNKSLIVRQSLHKTDRNTTSKKIQGGKTSLNNDRKGEKDVDQETNIQKRKRRRKKKRQRHDVDLDDTVRLQRRTRNILIRMKQEQNLIDAYAGEGWKGQSREKIRPEKELQRAKKQILKCKLSIRDAIHQLDSLSSVGSIEGSVIATDGSVSHEHIFCANCKINEVSPDNDIILCDGTCNRAFHQRCLDPPLETEDIPPEDQGWFCKYCDCKIEILEATNAHLGTRFPLDSTWQDVFKEEAAIPDGDAALLNQEEEWPSDDPEDDDYNPERKEESHGGINTEGNDEDASNDSSSSSSMWSLNGECSLLDEGINLEYYSNHHIDSDESGEIACGRRQRRAVDYKKLYDEMFGKDAPPCEQVSEDEDWGPGKRRRREKESEAVNTLMTLHESENKYPNNKSNDRIRGNSSGIKRPCFRFSHEAVEKLRQVFAENELPPKSVKDALSKELGLDAAKVNKWFKNARYMALKMRKLQEGGQQLQSITSKTSKDSTSQHVQEDEVLNPKVAKITGIRPLKKCENVTGKEKTKASSSPLKKKRPEIPPRLGENGNKDSMEVSDDVSLMKLLQERKKKVSFVFEGDSEAAELEFERLSKVKSKIDRLKQRLTGVQNCRSKGSDEVHLNEPSIMYVPIAELREKVK 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01677 712 MobiDBLite consensus disorder prediction 35 50 - -
Mepo6g01677 712 MobiDBLite consensus disorder prediction 548 564 - -
Mepo6g01677 712 MobiDBLite consensus disorder prediction 547 570 - -
Mepo6g01677 712 MobiDBLite consensus disorder prediction 106 122 - -
Mepo6g01677 712 MobiDBLite consensus disorder prediction 428 454 - -
Mepo6g01677 712 Coils Coil 657 677 - -
Mepo6g01677 712 SUPERFAMILY Homeodomain-like 480 545 IPR009057 -
Mepo6g01677 712 ProSiteProfiles 'Homeobox' domain profile. 483 543 IPR001356 GO:0003677
Mepo6g01677 712 Gene3D - 483 548 - -
Mepo6g01677 712 MobiDBLite consensus disorder prediction 329 343 - -
Mepo6g01677 712 FunFam pathogenesis-related homeodomain protein-like 224 284 - -
Mepo6g01677 712 ProSiteProfiles Zinc finger PHD-type profile. 230 287 IPR019787 -
Mepo6g01677 712 Pfam PHD-finger 232 287 IPR019787 -
Mepo6g01677 712 MobiDBLite consensus disorder prediction 52 88 - -
Mepo6g01677 712 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 20 711 - -
Mepo6g01677 712 SMART HOX_1 485 547 IPR001356 GO:0003677
Mepo6g01677 712 MobiDBLite consensus disorder prediction 328 374 - -
Mepo6g01677 712 MobiDBLite consensus disorder prediction 357 374 - -
Mepo6g01677 712 CDD homeodomain 486 547 IPR001356 GO:0003677
Mepo6g01677 712 MobiDBLite consensus disorder prediction 1 140 - -
Mepo6g01677 712 MobiDBLite consensus disorder prediction 594 627 - -
Mepo6g01677 712 SUPERFAMILY FYVE/PHD zinc finger 224 289 IPR011011 -
Mepo6g01677 712 Pfam Homeodomain 491 538 IPR001356 GO:0003677
Mepo6g01677 712 FunFam pathogenesis-related homeodomain protein 485 549 - -
Mepo6g01677 712 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 224 281 IPR013083 -
Mepo6g01677 712 ProSitePatterns Zinc finger PHD-type signature. 233 284 IPR019786 -
Mepo6g01677 712 CDD PHD_PRHA_like 232 284 IPR045876 -
Mepo6g01677 712 SMART PHD_3 232 285 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01677 Mepo-Chr6 18773783 18779961 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01677 137 547 Homeobox Transcription Factor Family AT4G29940 58.473 5.03e-155 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Mepo6g01677 Homeodomain 5.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01677 - - gmx:100787118 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01677 6 18773783 18779961 Mepo6g01677 6 18773783 18779961 ECH