Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01643 ATGTGGAATCCATTATCATGGGTGATGGAAGCTGCAGCTTTAATGGCAATTGCTCTTGCAAATGGTGAAGGACAGCCTCCAGATTGGCAAGATTTTGTGGGAATTATTTGCTTGTTGGTTATCAACTCTACTATCAGTTTCATTGAAGAAAACAATGCCGGCAATGCGGCTGCTGCTCTTATGGCAGGTCTTGCTCCTAAGACAAAGGTTCTTAGAGATGGTAAATGGAGTGAGCAAGAGGCTGCAATTTTAGTCCCAGGAGACATCGTTAGCATCAAACTCGGTGACATCATACCAGCTGATGCTCGTCTTCTAGAAGGCGATCCTTTAATGGTTGACCAAGCAGCATTAACAGGAGAATCACTTCCTGTAACAAGACATCCAGGACAAGAAGTTTTCTCTGGCTCAACTTGCAAACAAGGAGAAATCGAAGCCGTTGTTATAGCAACCGGTGTCCACACATTCTTCGGAAAAGCAGCACATCTAGTGGACAGTACAAACAATGTTGGACATTTCCAAATGGTTCTCAAATCAATTGGAAACTTTTGTATTTGTTCCATTGCAGTTGGTATGTTGGCTGAGATTATAGTCATGTATCCGATCCAACACCGCAAATATCGCGAAGGAATCGACAACCTTTTAGTCCTTTTGATCGGAGGAATTCCTATTGCTATGCCAACTGTTTTGTCTGTGACAATGGCTATTGGTTCTCATAAACTTGCTCAACAAGGTGCTATTACAAAGAGAATGACTGCCATTGAGGAAATGGCTGGTATGGATGTTCTTTGCAGCGACAAGACAGGAACACTTACACTTAACAAATTGAGTGTTGATAGGAACTTGATTGAGGTGTTTGTAAAGGGTGTTGATAAGGAACATGTGATGCTTCTTGCTGCTAGGGCTGCTAGGACTGAAAATCAGGATGCTATTGATGCTGCTATTGTTGGAATGCTTGCTGACCCTAAAGAGGCGAGGGCCGGGATAAGAGAGGTGCATTTCTTGCCATTCAATCCTGTTGATAAGAGAACTGCTTTGACTTATGTTGATAATAATGATGGAAGTTGGCATAGGGCTAGCAAAGGTGCTCCTGAACAGATCATGAACTTGTGTAACCTTAGGGATGATGAAAAGAAGAAGGTTCATGCTATTATTGAAAAGTTCGCTGAAAGAGGGCTACGTTCACTTGGTGTTGCTAGACAGAAAGTTCCTGAGAAAACAAAGGAAAGTGCTGGTGCTCCATGGCAATTTGTTGGTTTGTTGTCAGTGTTTGATCCTCCTAGGCATGACAGTGCTGAAACCATTAGAAGAGCTCTTAATCTTGGTGTAAATGTTAAGATGATTACAGGTGATCAACTTGCAATAGCTAAGGAGACTGGTAGGAGACTTGGTATGGGAACCAATATGTACCCATCTTCCACCTTACTGGGCCAAGATAAAGATGCAAATGTTGCTGCACTTCCAGTTGAAGAGCTGATTGAGAAAGCAGACGGATTTGCCGGAGTTTTTCCAGAACATAAATATGAAATTGTGAAGAAATTACAAGAGAGGAAGCACATTGTTGGAATGACTGGAGATGGTGTGAATGATGCTCCTGCATTGAAAAAAGCCGATATTGGAATTGCTGTTGCTGATGCTACTGATGCTGCAAGAGGTGCTTCTGATATAGTCTTAACAGAACCTGGTTTGAGTGTTATCATCAGTGCTGTCTTAACAAGTAGAGCTATCTTCCAAAGAATGAAGAACTATACGGTTCGTTACATTACATGTTCTTTTTTTCCCACTCATCATGTTGAATTAATATTTGGCTTCATGTTTATTGCACTGATATGGAAGTTTGATTTCTCTCCATTCATGGTTTTGATTATTGCCATTTTAAATGATGGAACAATCATGACAATTTCAAAGGACAGAGTTAAGCCATCTCCAATGCCTGATAGCTGGAAACTGAAAGAAATATTTGCAACCGGTGTCATGCTTGGAGGTTACTTAGCAATGATGACTGTGATATTCTTCTGGGTGGTGAAAGACACTAAATTCTTCCCTGAAAGATTTGGAGTTAGACATATTCATGACAGTCCAGATGAATTGACAGCTGCTTTGTATCTACAAGTCAGTATTGTTAGTCAGGCTTTGATCTTTGTAACTCGTTCGCGTAGCTGGTCTTATGTGGAACGCCCCGGAATGCTGTTAATGGGTGCTTTCGTCATTGCTCAACTGATTGCTACATTAATAGCAGTATATGCCAACTGGGGCTTTGCAAGAATCCAAGGAATTGGTTGGGGATGGGCAGGAGTCATCTGGCTTTATAGTATCATCTTCTATATTCCTCTTGACATCATCAAGTTTGCAATTCGCTATGGCTTGAGCGGCAAGGCTTGGGCAAATCTTCTCGAAAACAAGACCGCCTTTACAAATAAAAAGGACTATGGAAAAGAGGAGAGGGAAGCTCAATGGGCTCATGCTCAAAGGACCCTTCATGGACTTTCAGCACCAGAAGAAACTTCTAGTCTCTTCAATGACAAGAACACTTATAGAGAATTGTCTGAGATTGCTGAGCAGGCTAAGCGACGCGCTGAAGTTGCTAGGCTTCGTGAACTTCATACCCTTAAAGGACATGTTGAATCTGTTGTGAAGCTGAAAGGACTGGACATAGAGACTATGCAACAACATTATACTGTGTAA 2682 0.4165 MWNPLSWVMEAAALMAIALANGEGQPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLMVDQAALTGESLPVTRHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQMVLKSIGNFCICSIAVGMLAEIIVMYPIQHRKYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFVKGVDKEHVMLLAARAARTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYVDNNDGSWHRASKGAPEQIMNLCNLRDDEKKKVHAIIEKFAERGLRSLGVARQKVPEKTKESAGAPWQFVGLLSVFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSTLLGQDKDANVAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVRYITCSFFPTHHVELIFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGVMLGGYLAMMTVIFFWVVKDTKFFPERFGVRHIHDSPDELTAALYLQVSIVSQALIFVTRSRSWSYVERPGMLLMGAFVIAQLIATLIAVYANWGFARIQGIGWGWAGVIWLYSIIFYIPLDIIKFAIRYGLSGKAWANLLENKTAFTNKKDYGKEEREAQWAHAQRTLHGLSAPEETSSLFNDKNTYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIETMQQHYTV 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01643 893 Pfam haloacid dehalogenase-like hydrolase 259 537 - -
Mepo6g01643 893 ProSitePatterns E1-E2 ATPases phosphorylation site. 265 271 IPR018303 -
Mepo6g01643 893 FunFam Plasma membrane ATPase 66 150 - -
Mepo6g01643 893 Gene3D - 260 560 IPR023214 -
Mepo6g01643 893 Gene3D - 275 423 IPR023299 GO:0000166
Mepo6g01643 893 NCBIfam HAD-IC family P-type ATPase 35 280 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo6g01643 893 NCBIfam HAD-IC family P-type ATPase 498 610 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo6g01643 893 PRINTS P-type cation-transporting ATPase superfamily signature 263 277 - -
Mepo6g01643 893 PRINTS P-type cation-transporting ATPase superfamily signature 440 450 - -
Mepo6g01643 893 PRINTS P-type cation-transporting ATPase superfamily signature 418 429 - -
Mepo6g01643 893 PRINTS P-type cation-transporting ATPase superfamily signature 546 558 - -
Mepo6g01643 893 PRINTS P-type cation-transporting ATPase superfamily signature 523 542 - -
Mepo6g01643 893 PRINTS P-type cation-transporting ATPase superfamily signature 113 127 - -
Mepo6g01643 893 Coils Coil 844 864 - -
Mepo6g01643 893 CDD P-type_ATPase_H 1 782 IPR006534 GO:0008553|GO:0016020|GO:0120029
Mepo6g01643 893 SUPERFAMILY Calcium ATPase, transduction domain A 66 163 IPR008250 -
Mepo6g01643 893 SUPERFAMILY HAD-like 259 570 IPR036412 -
Mepo6g01643 893 SFLD C1.7: P-type atpase like 245 574 - -
Mepo6g01643 893 Gene3D - 842 893 - -
Mepo6g01643 893 SFLD p-type atpase 245 574 IPR044492 -
Mepo6g01643 893 Gene3D - 66 150 - -
Mepo6g01643 893 FunFam Plasma membrane ATPase 416 571 - -
Mepo6g01643 893 Gene3D - 28 756 - -
Mepo6g01643 893 Pfam E1-E2 ATPase 65 243 - -
Mepo6g01643 893 NCBIfam plasma-membrane proton-efflux P-type ATPase 1 747 IPR006534 GO:0008553|GO:0016020|GO:0120029
Mepo6g01643 893 PRINTS H+-transporting ATPase (proton pump) signature 495 511 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo6g01643 893 PRINTS H+-transporting ATPase (proton pump) signature 380 398 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo6g01643 893 PRINTS H+-transporting ATPase (proton pump) signature 554 579 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo6g01643 893 PRINTS H+-transporting ATPase (proton pump) signature 523 539 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo6g01643 893 PRINTS H+-transporting ATPase (proton pump) signature 701 722 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo6g01643 893 FunFam Plasma membrane ATPase 275 423 - -
Mepo6g01643 893 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 786 IPR023298 -
Mepo6g01643 893 PANTHER CALCIUM-TRANSPORTING ATPASE 1 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01643 Mepo-Chr6 18162341 18167942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01643 1 893 Primary Pumps ATPases AT2G18960 83.875 0.0 1498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01643 K01535 - gmx:100806580 1575.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g00374 1 3621052 3628284 Mepo6g01643 6 18162341 18167942 PCT