Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01637 ATGTCAAGTGATGGTCTTGCTGGAGTTGATCTTCTTCTAGTCATAGTAACAATTGTTATTATGGTAGTTGTTTTGGTTTGTGCATGTTTAAAAAGATTTCCGGTAAGTGATGGATCCATTAGTCCAGATTCACAAATCCTAGCAGTCACTATAAATGATTTTCTGAACAACTTGGAAAAGCCAATAAGATTCACTGGTCAACAACTAAGGATTGCAACAGACAACTACTCCAACTTGTTAGGGTCAGGTGGATTTGGTACTGTTTATAAAGGAATTCTTAATAATGGAACAATGGTAGCTGTGAAGGTTCTACGTGGAAGTTCCGATAAGAAAATTGAAGAACAATTTATGGCAGAAGTTGGAACAATTGGTAGAACTCATCACTTCAATCTTGTTAAGCTATATGGATTTTGCTTTGAGAAAAACTTGATAGCACTTGTTTATGAATACATGGGGAATGGATCACTTGATAGGTATTTGTTCCATGAAAAAAATGCCTTAGGTTATGAAAAGCTTCATGAGATTGCAATTGGTACAGCCAGAGGCATTGCTTACTTGCATGAATTGTGTGAACATAGAATAGTCCACTACGATATAAAACCAGGAAATATTCTCTTGGATGGGAATTTCAATCCTAAAGTTGCTGATTTTGGTTTGGCAAAACTTTGTAACCGGGAAAATACTCACATAACGATGACCGGGGGAAGGGGGACGCCTGGTTACGCTGCACCTGAGCTTTGGATGCCATTTCCTATAACTCACAAATGTGATGTTTATAGTTTTGGTATGCTGTTATTTGAAATTGTTGGTAGGAGAAGAAACCTTGACATTAAAAATAGTGAAAGCCAAGAGTGGTTTCCAATTTGGGTTTGGAAATTTTTTAATGCTGGACTATTGGAGGAGGCAATGATAATTTGTGGAATAGAAGAGAAAAATAGAGAGATTGCTGAAAGAATGGTTAAGGTAGCTTTATGGTGTGTTCAATATAGGCAAGAATTGAGGCCTATGATGAGTGATGTTGTGAAAATGTTGGAAGGTTCATTAGAAATTCCAAAGACTTTTAACCCATTTCAGCATTTGATTGATGGGACTAAGTTTACTACTCATTCAGAACAAGAGTCAAATACTTACACAACTAGTGTTTCTTCAATGATAAGTGATTCCAGTATTGTATGTGCTACTCCTATTATGAGGAAGTATGAGATTGAATTGGCATCTAGCACAGAGTGA 1230 0.365 MSSDGLAGVDLLLVIVTIVIMVVVLVCACLKRFPVSDGSISPDSQILAVTINDFLNNLEKPIRFTGQQLRIATDNYSNLLGSGGFGTVYKGILNNGTMVAVKVLRGSSDKKIEEQFMAEVGTIGRTHHFNLVKLYGFCFEKNLIALVYEYMGNGSLDRYLFHEKNALGYEKLHEIAIGTARGIAYLHELCEHRIVHYDIKPGNILLDGNFNPKVADFGLAKLCNRENTHITMTGGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIVGRRRNLDIKNSESQEWFPIWVWKFFNAGLLEEAMIICGIEEKNREIAERMVKVALWCVQYRQELRPMMSDVVKMLEGSLEIPKTFNPFQHLIDGTKFTTHSEQESNTYTTSVSSMISDSSIVCATPIMRKYEIELASSTE 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01637 409 ProSitePatterns Protein kinases ATP-binding region signature. 80 102 IPR017441 GO:0005524
Mepo6g01637 409 PANTHER OS07G0415500 PROTEIN 14 356 - -
Mepo6g01637 409 Gene3D Transferase(Phosphotransferase) domain 1 151 355 - -
Mepo6g01637 409 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 151 353 - -
Mepo6g01637 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Mepo6g01637 409 FunFam serine/threonine-protein kinase PBS1-like 49 150 - -
Mepo6g01637 409 SUPERFAMILY Protein kinase-like (PK-like) 58 345 IPR011009 -
Mepo6g01637 409 ProSiteProfiles Protein kinase domain profile. 74 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01637 409 Gene3D Phosphorylase Kinase; domain 1 50 150 - -
Mepo6g01637 409 Pfam Protein kinase domain 78 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01637 409 SMART serkin_6 74 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01637 Mepo-Chr6 18097293 18098723 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01637 63 362 Receptor kinase-like Gene Family AT5G38280 43.175 4.71e-77 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mepo6g01637 Pkinase 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01637 - - gmx:100803355 627.091