Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01634 ATGAGTAATTTTCACTATCAATTTCCTGATTCTCCTCCTTCCTTTTACACTTCATCAGACAATTTTGATACACAGGCTCAGAGAACTTTTGACAGATTTGGTGATACTGTTGATTCTTCTATGAAATGGGCTGTAGCAGAATCCATAGTATATGGAGTGGTGGTAATAATTGCTATTATAGCAATAGTGTATGCTATTATTGAGTGCTTGAAGAAAGCAGGAACAGTAATTCCAGCTTACACTCAGATTCCAACCACAGAAAAGGATAATCAAATATCTTCAAACTCATTATCTTCAGCCAGCAAAATTGAAGTTGTAATACCACAAGATTCAAAAGCTGAATTTCCAACCATGGAAAGATTCTTAAGCAACGTCAACAGAGAGAGACCAATAAGATTCACGCCTGAGAAACTCGATGAAATTACAAAAAGCTACTCAACCATATTAGGTTCTGGTGCTTTTGGAGTTGTCTTTAAAGGAGAATTAGCGAATGGAGAAAATGTTGCAGTGAAAGTTCTCAACTGTTTGGATATGGGAATGGAAGAGCAATTCAAAGCTGAAGTTAGCACTATTGGAAGAACTTATCATATCAATTTAGTCAAACTTTATGGATTCTGTTTTGGCCATGACACAAGAGCACTTGTTTATGAGTATGTTGAAAATGGTTCTCTTGACAAGTACTTATTTGGCAGCCAGAATCGTGACGTTGAGTTGCAAAAGTTTCATGAGATTGCAATTGGAACAGCGAAAGGAATTGCTTATTTACACGAGGATTGTCAACAAAGAATAATTCATTATGATATCAAACCAGAAAATGTTCTTCTTGACATGAAATTAGTACCAAAGATAGCTGATTTTGGATTAGCAAAGTTAAGAGGTAGAGAAAGTAACATTGTAATGAATACTCACTTTAGAGGAACGAGAGGATATGCCGCACCAGAAATGTGGAAGCCTTATCCAGTGACACATAAGTGCGATGTTTATAGTTTTGGTATTCTTCTATTCGAAATTGTTGGCAGAAGAAGGCATTTTGATTCTAGCTATAGTGAATCACAACAATGGTTTCCAAAATGGACATGGGAAATGTTTGAGAATAATGAATTGGTTGTTATGCTTGCACTTTGCGGAATTGAAGAGAAAGATAATGAGATAGCAGAGAGAATGTTGAAGGTTGCTTTATGGTGTGTTCAGTATTCACCAAATGATAGACCTCTAATGAGCACTGTTGTGAAGATGTTAGAGGGTGAAATTGAAATTTCTTCACCTCCATTTCCCTTCCATAATCTGGTTCCTGTTAAAGAAAATTTGACACAAGAAGGAAACACTGGAGATTCTGATGCTACTATATCATCGTGGAATACAGAATCTTTTAGCGAATCTTGTTCAAAAATCAAACACGAATCATTTCAGATTGAAAAACCTACTTAG 1428 0.3585 MSNFHYQFPDSPPSFYTSSDNFDTQAQRTFDRFGDTVDSSMKWAVAESIVYGVVVIIAIIAIVYAIIECLKKAGTVIPAYTQIPTTEKDNQISSNSLSSASKIEVVIPQDSKAEFPTMERFLSNVNRERPIRFTPEKLDEITKSYSTILGSGAFGVVFKGELANGENVAVKVLNCLDMGMEEQFKAEVSTIGRTYHINLVKLYGFCFGHDTRALVYEYVENGSLDKYLFGSQNRDVELQKFHEIAIGTAKGIAYLHEDCQQRIIHYDIKPENVLLDMKLVPKIADFGLAKLRGRESNIVMNTHFRGTRGYAAPEMWKPYPVTHKCDVYSFGILLFEIVGRRRHFDSSYSESQQWFPKWTWEMFENNELVVMLALCGIEEKDNEIAERMLKVALWCVQYSPNDRPLMSTVVKMLEGEIEISSPPFPFHNLVPVKENLTQEGNTGDSDATISSWNTESFSESCSKIKHESFQIEKPT 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01634 475 Gene3D Transferase(Phosphotransferase) domain 1 219 421 - -
Mepo6g01634 475 FunFam serine/threonine-protein kinase PBS1-like 113 218 - -
Mepo6g01634 475 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 424 - -
Mepo6g01634 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Mepo6g01634 475 Pfam Protein kinase domain 147 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01634 475 ProSitePatterns Protein kinases ATP-binding region signature. 149 171 IPR017441 GO:0005524
Mepo6g01634 475 SMART serkin_6 143 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01634 475 SUPERFAMILY Protein kinase-like (PK-like) 125 414 IPR011009 -
Mepo6g01634 475 Gene3D Phosphorylase Kinase; domain 1 117 218 - -
Mepo6g01634 475 FunFam Putative receptor-like protein kinase 219 421 - -
Mepo6g01634 475 ProSiteProfiles Protein kinase domain profile. 143 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01634 Mepo-Chr6 18082681 18084954 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01634 132 426 Receptor kinase-like Gene Family AT5G38280 41.722 1.12e-81 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mepo6g01634 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01634 - - aprc:113852543 697.582