Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01632 ATGGCAGCTACAGTTGTGGTGGTTATCATTCTAGTTATCGTTCTTATATTGTTAAGTGTTTTGACATGGTTACTACCAAATTGCCGAAAAATATTCGAGTTTGGTCGTGGTTCAGCTACTCCATACCCTCAATTTATCACAGTCACTATGGGAAAATTTCTAGAGGATATAGAAAAGGAGAAACAAGTTAGATTCACTAATCAACAACTAAGGATTGCGACCGATAACTTCTCCTATTTGTTGGGAACCGGAGGTTTTGGAGCAGTTTATAAAGGAAGTTTCAGTAACGGAATCATGATAGCTGTTAAGGTTCTGCATGGGAGTTCTGGTAAGAGAAATGATCAGCAATTTATGGCAGAAGTGGGTACAATTGGTAAAATTCATCACTTCAATCTTGTTAGACTATATGGATTTTGCTTTGAAAGAAATTTGATAGCACTTGTTTATGAATATATGGGAAATGGATCTCTTGACAAGTTTTTGTTTCAAGAGAACATGAATTTAGGGTTTGAAAAGCTTCAAGAGATTGCCATTGGGACAGCAAAAGGCATTGCTTATTTGCATGAAGAGTGTCAACAAAGAATAATCCACTACGATATAAAACCAGGAAATATTCTCTTAGATAAGAATTTTAACCCTAAAGTTGCTGATTTTGGTTTAGCAAAACTTTGCAATAGAGAAAATACTCACATAACGATGACCGGAGGAAGAGGGACACCCGGTTATGCTGCACCTGAACTTTGGATGCCGTTTCCTGTAACTCACAAGTGCGACGTTTATAGTTTTGGTATACTACTATTTGAAATTATAGGTAGGAGAAGAAACCATGATGTAAACCTTTCAGAAAGCCAAGAATGGTTTCCGATATGGGTTTGGAAAAAATTTGATGCTGAACAAGTGAATGAATTAGTCGAAGCTTGTGGGATAGAGGAGCAAAATATGGAGATTGTTGAGAGAATGGTTAAGATAGCTTTGTCATGTGTTCAATATAGGCCAGAATCAAGACCTATAATGAGTCTTGTGGTACAAATGTTGGAAGGTTTAGTTGAAATTCCAAAGCCATTGAATCCTTTTCAATACATGATTGATGGGACTTTTTCTTCTCTTCCAATGCCAATATCACAGATTAATACTGATACAAGTATTGGTTCTGGATCTTCTGTGATGGTAACTGAATCTAGTGTTGAAGGTGTTACTCCTGTAATGACAAAGTACCAAGTCGAATCAGCATCTGTCTAA 1239 0.3664 MAATVVVVIILVIVLILLSVLTWLLPNCRKIFEFGRGSATPYPQFITVTMGKFLEDIEKEKQVRFTNQQLRIATDNFSYLLGTGGFGAVYKGSFSNGIMIAVKVLHGSSGKRNDQQFMAEVGTIGKIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDKFLFQENMNLGFEKLQEIAIGTAKGIAYLHEECQQRIIHYDIKPGNILLDKNFNPKVADFGLAKLCNRENTHITMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGILLFEIIGRRRNHDVNLSESQEWFPIWVWKKFDAEQVNELVEACGIEEQNMEIVERMVKIALSCVQYRPESRPIMSLVVQMLEGLVEIPKPLNPFQYMIDGTFSSLPMPISQINTDTSIGSGSSVMVTESSVEGVTPVMTKYQVESASV 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01632 412 PANTHER OS07G0415500 PROTEIN 4 357 - -
Mepo6g01632 412 SMART serkin_6 75 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01632 412 FunFam serine/threonine-protein kinase PBS1-like 49 151 - -
Mepo6g01632 412 ProSiteProfiles Protein kinase domain profile. 75 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01632 412 Gene3D Phosphorylase Kinase; domain 1 51 151 - -
Mepo6g01632 412 FunFam Putative receptor-like protein kinase 152 353 - -
Mepo6g01632 412 Pfam Protein tyrosine and serine/threonine kinase 80 345 IPR001245 GO:0004672|GO:0006468
Mepo6g01632 412 Gene3D Transferase(Phosphotransferase) domain 1 152 354 - -
Mepo6g01632 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Mepo6g01632 412 SUPERFAMILY Protein kinase-like (PK-like) 65 367 IPR011009 -
Mepo6g01632 412 ProSitePatterns Protein kinases ATP-binding region signature. 81 103 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01632 Mepo-Chr6 18074311 18075744 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01632 64 360 Receptor kinase-like Gene Family AT5G38280 41.176 4.37e-75 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mepo6g01632 PK_Tyr_Ser-Thr 4.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01632 - - gmx:100819737 598.586