Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01630 ATGTCAAGTGCGAGTCTCATCATTGCAGGTGTCGTTACTGCAATTTTTATTTTAAGTGTTGTGGTAGGTTTACTACCTGGATGCCGAGGAAGACGCCCCCGTAGATCAGCTAGTGTACCCTCACACTTCATCACAGTCACAATGGATAAATTTCTAAATGATATGGAAAAGGAAAAACCAAAAAGATTCACAGATATGCAAATAAGGATTGCAACCGAAAACTATTCCTACCGGTTGGGATCGGGAGGTTTTGGAGTTGTTTATAAAGGAAGTTTAAGTGATGGAACCATGATAGCTGTCAAGGTTCTACATGGAAGTTCGGACAAAAGAATTGATCAACAGTTTATGGCAGAAGTTGGCACAATAGGTAAAGTTCACCATTTCAATCTTGTCCGGCTATATGGTTTTTGTTTTGAAAAGAACCTGATAGCACTTGTTTATGAATACATGAGGAACGGATCTCTTGATCAGTATTTGTTCCAAGAATACAATATCTTAGGATTTGAAAAGCTTCGAGAGATTGCAATTGGTACCGCAAGAGGCATTGCTTACTTACATGAAGAGTGCCAACAAAGAATAATCCACTACGATATTAAACCAGGAAATATTCTCTTGGATATGAATTTCAACCCTAAAGTTGCTGATTTTGGTTTGGCCAAACTTTGCAATAGAGAAAATACTCACATAACAATGACCGGAGGAAGAGGGACGCCTGGTTATGCAGCACCTGAACTTTGGATGCCGTTTCCTGTAACTCACAAGTGTGACGTTTATAGTTTTGGTATACTACTATTTGAAATTATAGGTAGGAGAAAAAACCATGATATAAACCTCTCAGAAAGCCAAGAATGGTTTCCAATGTGGGTTTGGAAAAAATTTGATGCTGAAAAATTGGAGGAGTTGATAGCAGCTTGTGGCATAGAGGAGCAAAACATGGAGAATGTAAAGAGAATGGTTAGGGTGGCTTTGTCATGTGTTCAGTATAGCCCAGAATCAAGACCTATAATGAGTGTTGTGGTACAAATGTTGGAAGGTTTAGTTGAAATTCCAAAACCTTTGAATCCGTTTCTACACATGATTGGTGGGATTTTCCCTACATCTCATATGAATACCGATACAAATAACGGTTCTGTGACTGTCTCTGTCTCTGACTCTTCTACGATGGTAACTGAATATAGCGTTGAAGGTGTTACTCGTATTATAACAAAATAG 1212 0.3853 MSSASLIIAGVVTAIFILSVVVGLLPGCRGRRPRRSASVPSHFITVTMDKFLNDMEKEKPKRFTDMQIRIATENYSYRLGSGGFGVVYKGSLSDGTMIAVKVLHGSSDKRIDQQFMAEVGTIGKVHHFNLVRLYGFCFEKNLIALVYEYMRNGSLDQYLFQEYNILGFEKLREIAIGTARGIAYLHEECQQRIIHYDIKPGNILLDMNFNPKVADFGLAKLCNRENTHITMTGGRGTPGYAAPELWMPFPVTHKCDVYSFGILLFEIIGRRKNHDINLSESQEWFPMWVWKKFDAEKLEELIAACGIEEQNMENVKRMVRVALSCVQYSPESRPIMSVVVQMLEGLVEIPKPLNPFLHMIGGIFPTSHMNTDTNNGSVTVSVSDSSTMVTEYSVEGVTRIITK 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01630 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Mepo6g01630 403 Pfam Protein tyrosine and serine/threonine kinase 78 343 IPR001245 GO:0004672|GO:0006468
Mepo6g01630 403 SUPERFAMILY Protein kinase-like (PK-like) 57 344 IPR011009 -
Mepo6g01630 403 ProSitePatterns Protein kinases ATP-binding region signature. 79 101 IPR017441 GO:0005524
Mepo6g01630 403 FunFam Putative receptor-like protein kinase 150 351 - -
Mepo6g01630 403 Gene3D Phosphorylase Kinase; domain 1 46 149 - -
Mepo6g01630 403 SMART serkin_6 73 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01630 403 FunFam serine/threonine-protein kinase PBS1-like 45 149 - -
Mepo6g01630 403 ProSiteProfiles Protein kinase domain profile. 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01630 403 PANTHER OS07G0415500 PROTEIN 7 358 - -
Mepo6g01630 403 Gene3D Transferase(Phosphotransferase) domain 1 150 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01630 Mepo-Chr6 18057581 18061288 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01630 8 349 Receptor kinase-like Gene Family AT1G56120 44.638 2.08e-76 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mepo6g01630 PK_Tyr_Ser-Thr 4.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01630 - - gmx:100305451 551.206