Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01628 ATGTGTTGTGCTACGGAAGCAACACTGGTTGAAAGAATTCTGAAGCCTCTTCATGGAGTCAAAGCTGTCTCAGTGATTGTTCCTGCTAGAACAGTTACTGTTGTTCATGATGTTCTCCTTATTTCTGAGTCACAAATAGCTGATGCACTGAATACAGCAAGGCTTGAAGCTAGTTTTAGACCACAAGGAGAGACCAATAATGAAAAGAAATGTCCAGATATACTTACAATGACATGTGGCTTGTTACTTGCACTTTCATTTTTGAAGTATATATATCCTCCTTTGGGATGGTTGGCTCTTGGTTCTGTTGCCATTGGATTCCCTAAAGTTCTATTTAGGGCTATAGCTTCCATTAGAGCTCTTACTCTTAATATCAACATTTTGGTTTTATTGGCAGTATGTGGTACTGCTGCTTTACAAGATTTTACAGATGGTGGAGTCATCATCTTTCTGTTCTCTATTGCTCAGTGGCTTGAGACAAGAGCAACTCATAAGGCAATGGTTGCAATGTCCTCTTTAACAAACATGGCTCCTCAAATGGCTATTGTTGCTGAGACCGGAGAACGTGTTGATGTCAATGATGTTAAGATGAACACCATCCTTGCAGTCAAGGCAGGTGATGCTATTCCTCTTGATGGAATTGTTGTGGAAGGAAAGTGTGAAGTTGATGAAAAAATGTTTACAGGAGAATCATTCCCTGTCACCAAAGAATCAGATTCACTTGTGTGGGCTGGAACTATTAATATGAATGGATATATAAGTGTAAGAACTACAGTGTTGGCAAAAGACACAGTGGTGGCAAGAATGTCAAGACTTGTTGAAGAAGCTTCTAGCAGAAAATCACAAGCACAAAGATTCATAGATAATTTTGCAAAGTACTATATTCCTGTGGTTGTGTTGATTTCAGCAAGCATTGCAGTGGTTCCAGCTGCATTAAGTGTTCCTGATATGGAGCCATGGTTTCATCTAGCACTTGTGGTTTTATTGAGTGGATGCCCTTGTGCTCTTATCCTCTCTACACCAGTTGCAATCTTTTGTGCTCTCACAAAAGCTGCAATAAGTGGATTACTATTGAAAGGTGGAGATTATCTTGAAACACTGTCTAGAATTAAGACAGTGGCTTTTGATAAAACAGGTACCATAACAAGAGGAGAGTTCTCTGTAACAGATTTTAGTGCTACAGATGACATCAACAATGAGACCTTACTGTACTGGATTTCAAGTATTGAGAGTAAATCAAGTCATCCAGTGGCAGGTGCACTAGTGGATTATGCAAGGTTGCACTCTATCAAATCAGTCCCAGAAAATGTGGAGAATTTTCAAAATTTTCCAGGTGAAGGAATTTTCGGTACAATTGATGGTAGGGATATCTATATAGGAAACAAGAGAGTTGGTGTCAGAGCTGGCTCTAAAAGAGATGATTGTGAAGTACAATTTCAAAGACCTGAGATTTCTACCAAGAAAAATAACTGTGAAGAAACTCTAGTTGGAGTTTTCAGCCTTGTTGATGCTTGTAGATCAGGTGCTTTAGAGGCAATGGAAGAGCTAAAGTTATTAGGAGTCAGATCGGTCATGTTGACAGGAGATAGCTCTCAGGTTGCCATGTATGTTCAGAGTCAGTTAAACAATGCTATAGACATAGTTCATGCAGAGCTTCTACCACATGAGAAGGCAAAACTCATTGAGAATTTCAAGAAAGAAGGGCCAATAGCCATGATAGGAGATGGCATCAATGATGCTCCTGCATTAGCTACAGCAGACATAGGCATATCAATGGGAATATCTGGTTCTGCTCTTGCAAATGAGACAAGCAACGCGATTCTCATGTCAAACGATATCCGAAAAGTACCTGAAGCGATTCGTTTAGCAAGAAAAACAACCAGAAAGCTCATTGAGAATGTCATTATTTCAGTTGGATTCAAATGTGCCATACTTGCATTGGCAATTGCAGGTTATCCATTAGTTTGGCTTGCTGTATTGACCGATGTTGGAACATGCTTACTTGTGATTTTCAATAGCATGTTAATTTTACAAGAGACTCGTAAATATGAAAAAAGAGAATCAACCAAAGGTAGTAAATATGGTAAATTTTTGGAAGATAAGACCAAACCATTACTTAAGAAGCAAAGTAATATTGATGTGGAAAAAGGACTTCTTAGTAGCGAAGAGTGTGGTAAAGATTGTTGTAAAAATGTTACTCATCATGTGGAAACTTCAAAGACAAGAAAAGATGAATCTTGTGGAGTTTCAAAGTTGAGTTTACTCAATGGAAATGATCATGGAAAGTTTATGTTTGTTGAAGTTCATGTTGTGAAGCCTTGTGTTATGATAAAAGATTCTAGCATTGCTACTTTGGAATCTCATGGCCAAAAAGACAAATCTATTACTGTTTCAGAGACAAGTGGTATTAGTGAGTGCTGCAAGAATAGATGCTGTAAAGATTAA 2445 0.3828 MCCATEATLVERILKPLHGVKAVSVIVPARTVTVVHDVLLISESQIADALNTARLEASFRPQGETNNEKKCPDILTMTCGLLLALSFLKYIYPPLGWLALGSVAIGFPKVLFRAIASIRALTLNINILVLLAVCGTAALQDFTDGGVIIFLFSIAQWLETRATHKAMVAMSSLTNMAPQMAIVAETGERVDVNDVKMNTILAVKAGDAIPLDGIVVEGKCEVDEKMFTGESFPVTKESDSLVWAGTINMNGYISVRTTVLAKDTVVARMSRLVEEASSRKSQAQRFIDNFAKYYIPVVVLISASIAVVPAALSVPDMEPWFHLALVVLLSGCPCALILSTPVAIFCALTKAAISGLLLKGGDYLETLSRIKTVAFDKTGTITRGEFSVTDFSATDDINNETLLYWISSIESKSSHPVAGALVDYARLHSIKSVPENVENFQNFPGEGIFGTIDGRDIYIGNKRVGVRAGSKRDDCEVQFQRPEISTKKNNCEETLVGVFSLVDACRSGALEAMEELKLLGVRSVMLTGDSSQVAMYVQSQLNNAIDIVHAELLPHEKAKLIENFKKEGPIAMIGDGINDAPALATADIGISMGISGSALANETSNAILMSNDIRKVPEAIRLARKTTRKLIENVIISVGFKCAILALAIAGYPLVWLAVLTDVGTCLLVIFNSMLILQETRKYEKRESTKGSKYGKFLEDKTKPLLKKQSNIDVEKGLLSSEECGKDCCKNVTHHVETSKTRKDESCGVSKLSLLNGNDHGKFMFVEVHVVKPCVMIKDSSIATLESHGQKDKSITVSETSGISECCKNRCCKD 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01628 814 SUPERFAMILY HMA, heavy metal-associated domain 1 63 IPR036163 GO:0046872
Mepo6g01628 814 CDD P-type_ATPase_HM 80 675 - -
Mepo6g01628 814 FunFam Copper-transporting ATPase 1, putative 163 277 - -
Mepo6g01628 814 SUPERFAMILY Calcium ATPase, transmembrane domain M 125 368 IPR023298 -
Mepo6g01628 814 FunFam Putative cadmium/zinc-transporting ATPase 3 1 61 - -
Mepo6g01628 814 ProSiteProfiles Heavy-metal-associated domain profile. 1 58 IPR006121 GO:0046872
Mepo6g01628 814 NCBIfam cadmium family heavy metal-translocating P-type ATPase 125 677 - -
Mepo6g01628 814 ProSitePatterns Hypothetical cof family signature 2. 573 595 - -
Mepo6g01628 814 FunFam Putative cadmium/zinc-transporting ATPase 3 385 505 - -
Mepo6g01628 814 NCBIfam heavy metal translocating P-type ATPase 125 675 IPR027256 GO:0006812|GO:0016020|GO:0019829
Mepo6g01628 814 SUPERFAMILY HAD-like 372 674 IPR036412 -
Mepo6g01628 814 Gene3D - 1 60 - -
Mepo6g01628 814 Pfam E1-E2 ATPase 184 352 - -
Mepo6g01628 814 ProSitePatterns E1-E2 ATPases phosphorylation site. 376 382 IPR018303 -
Mepo6g01628 814 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 1 679 - -
Mepo6g01628 814 SFLD C1.7: P-type atpase like 357 626 - -
Mepo6g01628 814 SUPERFAMILY Calcium ATPase, transduction domain A 187 273 IPR008250 -
Mepo6g01628 814 Gene3D - 365 624 IPR023214 -
Mepo6g01628 814 Pfam haloacid dehalogenase-like hydrolase 370 587 - -
Mepo6g01628 814 Gene3D - 385 505 IPR023299 GO:0000166
Mepo6g01628 814 Gene3D - 163 277 - -
Mepo6g01628 814 NCBIfam HAD-IC family P-type ATPase 147 653 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo6g01628 814 SFLD p-type atpase 357 626 IPR044492 -
Mepo6g01628 814 PRINTS P-type cation-transporting ATPase superfamily signature 519 529 - -
Mepo6g01628 814 PRINTS P-type cation-transporting ATPase superfamily signature 597 609 - -
Mepo6g01628 814 PRINTS P-type cation-transporting ATPase superfamily signature 573 592 - -
Mepo6g01628 814 PRINTS P-type cation-transporting ATPase superfamily signature 223 237 - -
Mepo6g01628 814 PRINTS P-type cation-transporting ATPase superfamily signature 374 388 - -
Mepo6g01628 814 PRINTS P-type cation-transporting ATPase superfamily signature 497 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01628 Mepo-Chr6 18039867 18044474 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01628 1 746 Primary Pumps ATPases AT4G30110 55.191 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01628 K01534 - gmx:100815324 1234.94