Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01579 ATGGAGATGAGCTGCCCGTCAAATGTTAACGGCGATGTCTCCGTGTGTTCTACTAGCACAGTTAATATTTCACACTCACCTCAGAGTTTCCGTGGCTTTGTGCAACAGCCTGTTTTTGTCAGTGGATGGATGTATGTGAACGAACATGGACAAATGTGCGGTCCCTATATTAAAGAGCAGTTATATGAGGGTTTAACTACCGGATTCTTGCCATTTGAGCTTCCTGTGTATCCTGTCATCAATGGCACAATAATGAACTCTGTACCGTTGAATTATTTTAAACAGTATCCTGACCATGTTTCCACCGGGTTTGCATATTTGAGCATGGATTTCTCTATTGCAAGGATGTCGAAAAATTGCTCCTCTTCTCAGGATATGGTATATGGGCAAGATCAGTCTGTTGAGCTTGCTGCTGTTATGGCTGTTAACCCTGATTCAAAGTCTGTTCCACAATCACATGTCAATGAATGCACTAAGGAATCCAATCACGTGGATTTAAGCTCAGAGGCATTCAGCAGGATAATTTCTTCTCAGATGTTGGGAGGAGAATGTTGTTGGCTTTATGAGGATAAAAAGGGTATGAAACATGGGCCACATTCCATTTCAGAGTTGATTTCTTGGCACCACCATGGATATCTTGAAGATTCAACGGTGATCTCTCATTTTGACAATAAGTATGGAACCTTTGTGTTGCTGTCTGCTGTAAATGCAATGAAAGGAGATATATGTGGAACCATCTGTGGATCAAATTCCAAAAGCAACGGAGTTGGTGATGTCATGAACTTAATTTGTGAAATATCTGAAGACATTTCTTCCCAATTGCACATGGGTGTAATGAAAGCTTCCCGTAAAGTTGTGCTAGATGGGATTATTGGCGATATCATTGCAGAGTTTATTACTGAAAAAAAATGCAAGAAGCAAAAACTTGAGTCTGCTGATCAAACTTCTGAAACTTACATGTTGAACAATAAAATGATGAATAAAGGTGCTTCCATTCCAAGTGAGCCTTCCCATATTTTGAACGGTCAGGCTTGTCATGAAATTTCCAGACCGTCTTCAACGAATGTTAAGTCAGTTGGAAGCATTGAAAATTTTTGGTGGTCATATGCTGTTGTTCGTAAAGTACTTTTTGATCATTCCTTGCAAGTCATGTGGAATGCAGTGTTTTTTGACCCGGTGGCAGAGTTCTTATTTTCCTGGAGGAAGAAGAAATATTGGTCTCATCCTAAGCCTCAATCATCTGTCAATGAATCTAAAGATTCTGTTGAAAAGTTAAAATCAGAAGCTTTGGCTCTCGGGACAGGTTCCTCTATATGCAATGTTGATGCTGATATCCAGTCTGGAGCTATGGCGACAGAAAGAGATTGTCATCTTGAGTTACTTTTATCTCCCAATAACATCAAAATTGGAAATACGGCCGAAGGTCAAAGAGTTTCATGCAGTTATGATAACTCTGAAGATTTGACACGCATTCTTGAAAGTGTGGAGAATGAGCTTCACTGCTCTGCAAAGGTGTCTTTAGCTGATTATGTTCGAAGTGTTGTTGAAAAGGAAGTAAACCAATTAATTCCTTCCCCAGAGAAGGACATATTTAGTGAGTTGCAGGTTGATGTTAGTGACTGCCGTATCTCAGAGATGGTTGCCGGTAAAACATCTGTTAAAGAGACTCTAAGCGACAAGTCTCCTGTGAAAAATGGAGACTCAATTTGCGTGCCTTCATCCGAAAATCATATGTCCAATGTATTCTCAAAAGCATTTCAAGAATTGTGTGGACATTTAAATGATGTGGTTGATGAAGAGGAGATTGGTGACCTACCGCCTGGATTCGGAAAGAACTCTCAAACAATATTCCCACACTGCAATTCAAAATTTCGACCTTCAAGAACAGTTAAATGTAATCCTAAGATTACAGAATATGTTGCAGCTGCACTGTGCAGACAGAAGCTGCATGATGAAGTTCTAAAAGTCTGGCAGCTGTCGATTCTTGATTCTACATTTAAAAAAGTTATGTCATCATGTACTATAAAGAAGAATTTCCAGTCTCGTGGTCATGGGAAGGGGAAGTTGTTCAGTGCAAACAAGGAGCATTTGAAGGAAGGCACAAAATTGGGACTAGGAAAAGTGAAGAAAGGCACAAAATTGGGACTAGGAAAAGTGAAGGAAGGTGCAAAAAGTTCTGGAGTTCCTCTGGCGATTGAAAAGTATACGTATCACCGCAAGAATCCATCACGGAAAGAGCTTTGCTCCTCTAAGCCCGTTGTAGAAGATAATTCAGGTCCAGGGAAGAAGCCTTTGGCTAAGTTAAGGAAAGATGTTTCTGGAGATGTGAATGAGAGTGCAGAAGTTAAAGCAACAGCTATTAAACGTGGAAAGGCTAAGATGATTAAAGGGAAGAAGGATACATCTTCTAAGAGGAACTCTTCTGTCAATGTCGATAATAGCTCACCCAGCGATCAATTATCCTTGAAGAATAAAACTAGCCAGAAAGTATCCAAGTTTGCACGTACAGTTCAAAACGGTGTTACGGATGTTGTGAAGTCTAATAAAAAGAGGCTCTTGGCGTCAACTGATAATAGTGTTGGTATGAAGGTGGTCAAAAGAAATAACACTGATGTCACCATTCAGAGGAAGACCACTGGTCATATCTCCAAAGAGAAACTAAATGTGACAAATCCAGTATCAAAATCAAAAAGAAAGCATCAGCCAGATGGTGTTACATCTTCTCATCCCGCAAAGGTTTTGAAAATTTCAAATAGCGGTGCAAGTCTGGGAGCCAGCAAACAAGTAACTGAGGCACGGAGGAATTCTGCTAAATCCAAGTCATTGGATTCGTGTCCTAGATCTATTGGATGTGCTAGGACTTCTATTGATGGATGGGAATGGCATAAATGGTCTCAAAGTGCTAGTGCCACAAGTAGAGCACGTGTCAGGGGTCTTCCGCTTTTAAAAAACAAGTACATAAATTCTGAAAATAATTCATCTCAGTTGTCAAATGGTAAGGGTCTTTCTGCAAGAACAAATAGGGTGAAGTTACGTAACCTTCTTGCCGCAGCTGAGGGTGCGGATCTTCTGAAAGTGCCTCAATTGAAGGCACGGAAAAAGCGACTACGTTTTCAAAGGAGCAAGATACATGACTGGGGTCTTGTTGCCTTGGAGCCAATTGAAGCAGAGGACTTTGTCATTGAGTATATTGGAGAATTAATTCGTCCTCGGATATCTGATATACGTGAGCTTCAATATGAGAAGATGGGAATTGGAAGCAGTTACCTTTTCAGACTCGATGACGGTTATGTGGTTGATGCTACAAAGAGAGGTGGGATTGCACGATTTATTAACCATTCTTGTGAGCCCAACTGTTACCCAAAGGTTATATCTTTTGAGGGCCAAAAGAAGATTTTTATATATGCCAAACGGCATATAAATGCCGGTGAAGAAATTACATACAATTATAAGTTTCCCTTGGAGGAGAAAAAGATTCCCTGCAACTGTGGTTCCAAAAAGTGCCGCGGATCAATGAATTAG 3522 0.4037 MEMSCPSNVNGDVSVCSTSTVNISHSPQSFRGFVQQPVFVSGWMYVNEHGQMCGPYIKEQLYEGLTTGFLPFELPVYPVINGTIMNSVPLNYFKQYPDHVSTGFAYLSMDFSIARMSKNCSSSQDMVYGQDQSVELAAVMAVNPDSKSVPQSHVNECTKESNHVDLSSEAFSRIISSQMLGGECCWLYEDKKGMKHGPHSISELISWHHHGYLEDSTVISHFDNKYGTFVLLSAVNAMKGDICGTICGSNSKSNGVGDVMNLICEISEDISSQLHMGVMKASRKVVLDGIIGDIIAEFITEKKCKKQKLESADQTSETYMLNNKMMNKGASIPSEPSHILNGQACHEISRPSSTNVKSVGSIENFWWSYAVVRKVLFDHSLQVMWNAVFFDPVAEFLFSWRKKKYWSHPKPQSSVNESKDSVEKLKSEALALGTGSSICNVDADIQSGAMATERDCHLELLLSPNNIKIGNTAEGQRVSCSYDNSEDLTRILESVENELHCSAKVSLADYVRSVVEKEVNQLIPSPEKDIFSELQVDVSDCRISEMVAGKTSVKETLSDKSPVKNGDSICVPSSENHMSNVFSKAFQELCGHLNDVVDEEEIGDLPPGFGKNSQTIFPHCNSKFRPSRTVKCNPKITEYVAAALCRQKLHDEVLKVWQLSILDSTFKKVMSSCTIKKNFQSRGHGKGKLFSANKEHLKEGTKLGLGKVKKGTKLGLGKVKEGAKSSGVPLAIEKYTYHRKNPSRKELCSSKPVVEDNSGPGKKPLAKLRKDVSGDVNESAEVKATAIKRGKAKMIKGKKDTSSKRNSSVNVDNSSPSDQLSLKNKTSQKVSKFARTVQNGVTDVVKSNKKRLLASTDNSVGMKVVKRNNTDVTIQRKTTGHISKEKLNVTNPVSKSKRKHQPDGVTSSHPAKVLKISNSGASLGASKQVTEARRNSAKSKSLDSCPRSIGCARTSIDGWEWHKWSQSASATSRARVRGLPLLKNKYINSENNSSQLSNGKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPRISDIRELQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYPKVISFEGQKKIFIYAKRHINAGEEITYNYKFPLEEKKIPCNCGSKKCRGSMN 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01579 1173 ProSiteProfiles SET domain profile. 1034 1151 IPR001214 GO:0005515
Mepo6g01579 1173 MobiDBLite consensus disorder prediction 762 779 - -
Mepo6g01579 1173 CDD SET_SETD1 1022 1169 IPR037841 GO:0042800|GO:0048188
Mepo6g01579 1173 SMART PostSET_3 1157 1173 IPR003616 -
Mepo6g01579 1173 ProSiteProfiles Post-SET domain profile. 1157 1173 IPR003616 -
Mepo6g01579 1173 MobiDBLite consensus disorder prediction 741 779 - -
Mepo6g01579 1173 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 4 1173 IPR044570 GO:0042800|GO:0051568
Mepo6g01579 1173 MobiDBLite consensus disorder prediction 878 944 - -
Mepo6g01579 1173 Gene3D SET domain 925 1173 IPR046341 -
Mepo6g01579 1173 ProSiteProfiles GYF domain profile. 183 233 IPR003169 GO:0005515
Mepo6g01579 1173 Gene3D - 175 253 IPR035445 -
Mepo6g01579 1173 MobiDBLite consensus disorder prediction 806 829 - -
Mepo6g01579 1173 SMART set_7 1034 1157 IPR001214 GO:0005515
Mepo6g01579 1173 SUPERFAMILY GYF domain 180 238 IPR035445 -
Mepo6g01579 1173 Pfam SET domain 1046 1150 IPR001214 GO:0005515
Mepo6g01579 1173 MobiDBLite consensus disorder prediction 911 932 - -
Mepo6g01579 1173 MobiDBLite consensus disorder prediction 791 829 - -
Mepo6g01579 1173 SUPERFAMILY SET domain 1030 1170 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01579 Mepo-Chr6 17309669 17320095 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01579 1033 1173 C2H2 Transcription Factor Family AT2G23740 35.583 4.41e-17 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo6g01579 SET 3.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01579 - - gmx:100805708 1544.25