Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01571 ATGGTGAAATTCTTGAAGCCAAACAAAGCAGTCATCGTCCTTCAAGGACGCTATGCCGGGAAGAAAGCTGTCATCGTGAAGAATTTCGACGACGGAACCCGCGACCGTGCTTACGGCCATTGTCTCGTTGCAGGGATCAAGAAGTATCCAGCTAAGGTTATCAAGAAGGATTCAGCGAAGAAAACTGCTAAGAAATCGCGTGTGAAGGCTTTTGTGAAACTCGTGAACTACCAGCATCTGATGCCGACTCGGTACACTCTTGATGTTGATCTGAAGGAAGTTGTTACCACTGATGTTCTTCAGAGTAAGGATAAGAAGGTGACTGCTTTGAAGGAGGCGAAGAAGAGGTTCAAGGAGAGGTTTAAGACTGGGAAGAATAGGTGGTTCTTTACCAAGCTCAGGATTTTGAGCTGA 414 0.4614 MVKFLKPNKAVIVLQGRYAGKKAVIVKNFDDGTRDRAYGHCLVAGIKKYPAKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKEVVTTDVLQSKDKKVTALKEAKKRFKERFKTGKNRWFFTKLRILS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01571 137 PANTHER 60S RIBOSOMAL PROTEIN L27 1 135 IPR001141 GO:0003735|GO:0005840|GO:0006412
Mepo6g01571 137 FunFam 60S ribosomal protein L27 1 135 - -
Mepo6g01571 137 SMART kow_9 4 31 IPR005824 -
Mepo6g01571 137 Pfam KOW motif 7 36 IPR005824 -
Mepo6g01571 137 Coils Coil 100 120 - -
Mepo6g01571 137 Gene3D - 1 135 IPR038655 -
Mepo6g01571 137 Pfam Ribosomal L27e protein family 52 134 IPR001141 GO:0003735|GO:0005840|GO:0006412
Mepo6g01571 137 CDD KOW_RPL27 6 88 IPR041991 -
Mepo6g01571 137 SUPERFAMILY Translation proteins SH3-like domain 2 134 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01571 Mepo-Chr6 17231291 17231869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01571 1 135 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 85.185 1.35e-82 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01571 K02901 - csv:101212413 233.802