Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01567 ATGATCATTTTTGAAAAAAAATATGTTGATCATCTTCTTCATTTTACTCTTCAAAATCTCAATTTCTCTCTTAAACCTCCTCTCTCACTAACTACACCGATGGCTTCCGGTGTGAGAAACTTACAGCTCACCAATTTACCTGCCGGCCGAAAAATTTCCGCCGTCGACAACTCCGATGACTTGGAAGAAGTATGGCTTCTAGACTCCGAGGACGGAGTTGACGATGAAACGAGAAGAATTCAGGTGAGGATCACCGGTATGACATGCACCGCTTGCTCCAATTCCATTGAATCAGCTCTCAAAGCCGTTGACGGTGTTTTCAGTGCCTCCGTCGCGCTACTACAGAACAAAGCTGACGTCGTTTTCAACCCTGCTCTCGTCAAGGATGAAGACATTAAAAATGCAATTGAAGATGCAGGGTTTGAAGCAGAAATATTACCTGAATCCAGTGGACCTGGAAAGGCTCCACATGAAACCCTGGTTGGACAGTTCACAATTGGAGGTATGACATGTGCAGCTTGTGTAAATTCTGTTGAAGGTATTTTGAGAAATCTTCCAGGGGTTAAAAGAGCCATGGTAGCTTTGGCTACTTCGTTAGGCGAGGTTGAATATGATCCAAGTGTAATTAGTAAAGATGATGTAGTCAATGCAATTGAAGATTCTGGCTTTGAAGCCTCGTTTGTACAGAGCAACGAGCAGGATAAAATTATTTTTGGAGTTGTTGGTGTGTATAGTTTAACAGACGCACAGGTTTTAGAAGGCATGCTTAGTAACATGAAAGGAGTAAGACAGTTTCGTTTTGACCAGTTATCGAGTGAATTAGATGTTCTGTTTGATCCTCAAGTTCTCAGTCCGAGGTCCTTGGTTGATGGGATTCATGGGGAAAGCAATGGAAAGTTTGAATTACATGTTAGAAGCCCTTATACACGAATGACTTCTAAAGATGTTGAAGAGACCTCGACTATATTTCGGCTCTTTGTCTCCAGCCTGTGTCTTAGTGTTCCTCTCTTCTTCATGAAGGTAGTTTGTCCTCATATTCCGTTTTTGTATTCCTTGTTACTTTGGCGATGCGGGCCTTTCCTCATGAGTGATTGGTTGAAATGGGCATTGGTGAGTGTAATCCAATTTGGAATAGGGAAACGCTTTTACATTGCAGCTGGCAGGGCTCTTAAGAATGGTTCAACAAACATGGATGTCCTGATTGCTGTGGGAACTACCGCCTCTTACGTTTATTCTGTTTGTGCTCTTCTATATGGTGCTCTTACTGGATTTTGGTCCCCAACTTACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTGGGGAAGTATTTGGAAGTCCTTGCCAAGGGAAAGACTTCTGATGCCATCAAGAAATTAGTTGAACTTGCTCCTGCAACAGCTTTATTAATTATTAACGATAAAGATTGTAAATCTATTGAAGAAAGGGAAATTGATTCCTTGCTTGTTCAACCTGGTGACACATTGAAAGTTCTTCCTGGTACGAAGATTCCTGCTGATGGTATTGTTACTTGGGGATCAAGTTATGTAAATGAGAGCATGGTAACCGGTGAATCTGTACCTGTTTCGAAGGAGGTGAATGCTTCTGTTATTGGGGGTACAATAAATTTACATGGCGTCCTTCACATAAAAGCTACTAAAGTAGGATCTGATACAGTTTTGAGTCAGATAATAAGTATGGTTGAAACAGCACAGATGTCCAAAGCTCCCATTCAGAAGTTTGCTGATTATGTAGCAAGCATATTTGTTCCTACAGTTGTTTCTTTGGCATTGCTGACATTTTTGGGCTGGTATATAGCTGGTTCTATTGGAGCTTACCCAGAAGAATGGCTTCCAGAAAATGGAAATCACTTTGTGTTTGCCCTAATGTTCTCAATATCTGTAGTAGTGATTGCATGTCCCTGTGCACTTGGCTTAGCAACACCGACAGCTGTCATGGTGGCAACAGGGGTAGGGGCTAACAATGGAGTATTAATTAAAGGAGGAGATGCCTTGGAAAGGGCTCAGATGGTGAAGTATGTGATATTTGATAAAACAGGCACTCTAACTCAGGGAAAAGCCAGTGTTACTACTGCCAAAGTATTCACTGGAATGCAACGTGGTGAATTTCTTACATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCACTGGCAAAAGCAGTATTAGCATATGCACGCCACTTTCATTTCTTTGAGGATTCTTCAGATGCTACACAGAATGATGCAAAGTCTGGATGGCTTTTTGATGTCTCAGACTTCTCTGCTCTCCCAGGAAGAGGTGTTGAATGTTCTAAAGACGGGAGGCGTATTTTGGTTGGCAACAGGAAGTTGATGGTCGAAAATGGTATAGATATTTCAACAGAAGTGGAAAATTTTGTAGTTGAGCTGGAACAAAATGCGCAGACAGGGATACTAGTATCATATGATGATATATTAATCGGAGTTTTGGGGGTTGCAGACCCACTAAAGAGAGAAGCTTCTGTGGTTATAGAGGGCCTCCAGAAAATGGGTGTCATACCTGTTATGGTTACAGGAGATAACTGGCGAACAGCTCGTGCTGTTGCAAAGGAGGTTGGAATCCAAGATGTAAGGGCAGAGGTGATGCCTGCGGGAAAAGCCGAAATTGTTCGTTCATTCCAAAAGGACGGAAGCATAGTTGCAATGGTGGGCGATGGTATCAACGACTCTCCAGCATTAGCTGCTGCTGATGTTGGCATGGCAATTGGGGCTGGAACCGATGTTGCAATAGAAGCTGCTAACTTTGTGTTAATGAGAAATAACCTGGAAGATGTGATCACAGCCATTCATCTTTCCCGGAAGACGTTCTCTCGTATCAGATTGAATTATGTATTCGCAATGGGATACAATGTTGTTGCTATACCAGTTGCAGCTGGGGCTTTATATCCTTCACTGGGTATCAAGCTGCCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCTTCTGTAAGTGTTGTATGCTCTTCTTTGCTTCTTAAAAGATATAGAAGACCCAGACTAAGATATAGTAAACCCAGAGTTACCACAGGACTTGAAATAATTGTAGAATAA 3096 0.4225 MIIFEKKYVDHLLHFTLQNLNFSLKPPLSLTTPMASGVRNLQLTNLPAGRKISAVDNSDDLEEVWLLDSEDGVDDETRRIQVRITGMTCTACSNSIESALKAVDGVFSASVALLQNKADVVFNPALVKDEDIKNAIEDAGFEAEILPESSGPGKAPHETLVGQFTIGGMTCAACVNSVEGILRNLPGVKRAMVALATSLGEVEYDPSVISKDDVVNAIEDSGFEASFVQSNEQDKIIFGVVGVYSLTDAQVLEGMLSNMKGVRQFRFDQLSSELDVLFDPQVLSPRSLVDGIHGESNGKFELHVRSPYTRMTSKDVEETSTIFRLFVSSLCLSVPLFFMKVVCPHIPFLYSLLLWRCGPFLMSDWLKWALVSVIQFGIGKRFYIAAGRALKNGSTNMDVLIAVGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLEVLAKGKTSDAIKKLVELAPATALLIINDKDCKSIEEREIDSLLVQPGDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESVPVSKEVNASVIGGTINLHGVLHIKATKVGSDTVLSQIISMVETAQMSKAPIQKFADYVASIFVPTVVSLALLTFLGWYIAGSIGAYPEEWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQMVKYVIFDKTGTLTQGKASVTTAKVFTGMQRGEFLTLVASAEASSEHPLAKAVLAYARHFHFFEDSSDATQNDAKSGWLFDVSDFSALPGRGVECSKDGRRILVGNRKLMVENGIDISTEVENFVVELEQNAQTGILVSYDDILIGVLGVADPLKREASVVIEGLQKMGVIPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKAEIVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDVAIEAANFVLMRNNLEDVITAIHLSRKTFSRIRLNYVFAMGYNVVAIPVAAGALYPSLGIKLPPWVAGACMALSSVSVVCSSLLLKRYRRPRLRYSKPRVTTGLEIIVE 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01567 1031 CDD HMA 163 226 IPR006121 GO:0046872
Mepo6g01567 1031 FunFam Copper-transporting ATPase RAN1 690 777 - -
Mepo6g01567 1031 PRINTS P-type cation-transporting ATPase superfamily signature 898 917 - -
Mepo6g01567 1031 PRINTS P-type cation-transporting ATPase superfamily signature 823 834 - -
Mepo6g01567 1031 PRINTS P-type cation-transporting ATPase superfamily signature 683 697 - -
Mepo6g01567 1031 PRINTS P-type cation-transporting ATPase superfamily signature 845 855 - -
Mepo6g01567 1031 PRINTS P-type cation-transporting ATPase superfamily signature 519 533 - -
Mepo6g01567 1031 PRINTS P-type cation-transporting ATPase superfamily signature 921 933 - -
Mepo6g01567 1031 Pfam Heavy-metal-associated domain 82 142 IPR006121 GO:0046872
Mepo6g01567 1031 Pfam Heavy-metal-associated domain 164 224 IPR006121 GO:0046872
Mepo6g01567 1031 NCBIfam copper ion binding protein 80 143 IPR006122 GO:0005507
Mepo6g01567 1031 NCBIfam copper ion binding protein 163 225 IPR006122 GO:0005507
Mepo6g01567 1031 Gene3D - 451 573 - -
Mepo6g01567 1031 Gene3D - 776 829 IPR023299 GO:0000166
Mepo6g01567 1031 Gene3D - 690 775 IPR023299 GO:0000166
Mepo6g01567 1031 SFLD p-type atpase 665 950 IPR044492 -
Mepo6g01567 1031 ProSiteProfiles Heavy-metal-associated domain profile. 160 226 IPR006121 GO:0046872
Mepo6g01567 1031 FunFam Copper-exporting P-type ATPase 778 829 - -
Mepo6g01567 1031 CDD HMA 81 144 IPR006121 GO:0046872
Mepo6g01567 1031 FunFam Copper-exporting P-type ATPase A 76 146 - -
Mepo6g01567 1031 SUPERFAMILY HMA, heavy metal-associated domain 75 148 IPR036163 GO:0046872
Mepo6g01567 1031 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 69 1014 - -
Mepo6g01567 1031 ProSiteProfiles Heavy-metal-associated domain profile. 78 144 IPR006121 GO:0046872
Mepo6g01567 1031 FunFam Copper-transporting ATPase 1, putative 451 573 - -
Mepo6g01567 1031 SUPERFAMILY Calcium ATPase, transmembrane domain M 415 984 IPR023298 -
Mepo6g01567 1031 NCBIfam HAD-IC family P-type ATPase 436 710 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo6g01567 1031 NCBIfam HAD-IC family P-type ATPase 769 978 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo6g01567 1031 Gene3D - 650 955 IPR023214 -
Mepo6g01567 1031 ProSitePatterns Heavy-metal-associated domain. 166 195 IPR017969 GO:0046872
Mepo6g01567 1031 Pfam E1-E2 ATPase 464 662 - -
Mepo6g01567 1031 SUPERFAMILY Calcium ATPase, transduction domain A 483 569 IPR008250 -
Mepo6g01567 1031 CDD P-type_ATPase_Cu-like 324 994 - -
Mepo6g01567 1031 SUPERFAMILY HMA, heavy metal-associated domain 160 232 IPR036163 GO:0046872
Mepo6g01567 1031 PRINTS Copper-transporting ATPase 1 signature 105 128 - -
Mepo6g01567 1031 PRINTS Copper-transporting ATPase 1 signature 134 154 - -
Mepo6g01567 1031 PRINTS Copper-transporting ATPase 1 signature 79 104 - -
Mepo6g01567 1031 FunFam Probable copper-transporting ATPase HMA5 787 955 - -
Mepo6g01567 1031 Gene3D - 162 227 - -
Mepo6g01567 1031 ProSitePatterns E1-E2 ATPases phosphorylation site. 685 691 IPR018303 -
Mepo6g01567 1031 ProSitePatterns Heavy-metal-associated domain. 84 114 IPR017969 GO:0046872
Mepo6g01567 1031 Gene3D - 77 148 - -
Mepo6g01567 1031 SFLD Haloacid Dehalogenase 665 950 - -
Mepo6g01567 1031 FunFam Copper-exporting P-type ATPase A 158 228 - -
Mepo6g01567 1031 SUPERFAMILY HAD-like 682 1004 IPR036412 -
Mepo6g01567 1031 NCBIfam heavy metal translocating P-type ATPase 397 1007 IPR027256 GO:0006812|GO:0016020|GO:0019829
Mepo6g01567 1031 Pfam haloacid dehalogenase-like hydrolase 679 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01567 Mepo-Chr6 17204449 17211303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01567 34 1031 Primary Pumps ATPases AT5G44790 71.976 0.0 1466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01567 K17686 - gmx:100804960 1661.74