Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01564 ATGAATGAACAAGATCACACTGAAGTTGGCAAAAACGATAAACCTGTTCGTGTTTATGCTGATGGAATTTACGATCTCTTTCACTTTGGCCATGCCCGTTCTCTTGAACAAGCCAAGAAATCGTTTCCAAACACATATCTCCTTGTTGGATGCTGCAGTGATGAGATCACACACAAGTACAAGGGTAAAACTGTTATGAATGAGCAAGAACGCTATGAGTCTCTTCGTCACTGCAAGTGGGTTGATGAAGTTATTCCAGATGTGCCGTGGGTAATCAATCAGGAGTTCATTGACAAGCATAAAATTGACTATGTGGCACATGATGCTCTTCCTTATGCTGATACAAGTGGAGCTGGAAATGATGTCTATGAATTTGTCAAGGCTATTGGAAAATTTAAGGAAACAAAGAGGACTGAAGGAATTTCTACCTCTGATATCATAATGAGAATCATCAAAGATTACAACCAGTATGTAATGCGTAATCTGGATCGTGGTTATTCAAGAAAGGAGCTAGGTGTTAGCTATGTCAAGGAGAAAAGATTGAGAATGAACATGGGACTTAAAAAGTTGCAGGAGAGAGTCAAGAAACAGCAAGAGACTGTAGGAAAGAAGATAGGAACAGTGAGAAGAATTGCTGGGATGAACCGTACTGAATGGGTTGAAAATGCAGATCGATTAGTTGCTGGATTTCTCGAGATGTTTGAAGAAGGATGCCACAAAATGGGAACAGCAATCAGAGACAGAATTCAAGAACAACTGAAAGCACAGCAGCTAAAATCTCTTCTTTATGATGAGTGGGATGATGACGTTGACGACGAATTCTATGAAGATGAATCTGTAGAATACTACAGCGACTAA 858 0.3974 MNEQDHTEVGKNDKPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCSDEITHKYKGKTVMNEQERYESLRHCKWVDEVIPDVPWVINQEFIDKHKIDYVAHDALPYADTSGAGNDVYEFVKAIGKFKETKRTEGISTSDIIMRIIKDYNQYVMRNLDRGYSRKELGVSYVKEKRLRMNMGLKKLQERVKKQQETVGKKIGTVRRIAGMNRTEWVENADRLVAGFLEMFEEGCHKMGTAIRDRIQEQLKAQQLKSLLYDEWDDDVDDEFYEDESVEYYSD 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01564 285 CDD CCT 14 165 IPR041723 -
Mepo6g01564 285 NCBIfam cytidyltransferase-like domain 17 84 IPR004821 GO:0003824|GO:0009058
Mepo6g01564 285 FunFam Choline-phosphate cytidylyltransferase 2 1 236 - -
Mepo6g01564 285 SUPERFAMILY Nucleotidylyl transferase 17 149 - -
Mepo6g01564 285 Gene3D HUPs 1 236 IPR014729 -
Mepo6g01564 285 PANTHER CYTIDYLYLTRANSFERASE 8 280 IPR045049 GO:0004105|GO:0006657
Mepo6g01564 285 Pfam Cytidylyltransferase-like 19 148 IPR004821 GO:0003824|GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01564 Mepo-Chr6 17181576 17186654 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01564 42 277 Acyl Lipid Metabolism Gene Families AT2G32260 77.215 1.08e-134 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01564 K00968 - gmx:100786249 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01564 6 17181576 17186654 Mepo6g01564 6 17181576 17186654 ECH