Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01562 ATGAAAGCTGTAGAAGCTGCATTCGATATTGATAATTTAGGGCTTGAATTATTACCAGGAATTAGAGACCTTGGAGGTGTTATTATTGATTTTCAAGGTGGAAACTATAAAATCAGCAATCCCATCACATTTCCTTCATCTGCTGGCAATCTTGTGGTAAACGGAGGAACCTTAGGAGCTTCTGAAACATTTCCAACTGATAGATACCTTGTTGAATTAAGTGCATCAAATTCAAAAACCCTCCAAAATTCAACAAAAGCATCCAACAACAGAATACTTGAACAAACAATAGGAATTTACTATGAAGACGTAACATTTAGAGACATCCTCTTCGAATCAAGCTACCGAGGTGGAGGAATACTCATCGTCGATTCAGCTAGAATCAGAATCGACAATTGTTTCTTCCTCCATTTCACCACAAAAGGAATTAAAGTTCAAAGTGATGGAACAACGTATAAAGATTGA 465 0.3656 MKAVEAAFDIDNLGLELLPGIRDLGGVIIDFQGGNYKISNPITFPSSAGNLVVNGGTLGASETFPTDRYLVELSASNSKTLQNSTKASNNRILEQTIGIYYEDVTFRDILFESSYRGGGILIVDSARIRIDNCFFLHFTTKGIKVQSDGTTYKD 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01562 154 Gene3D - 2 154 IPR012334 -
Mepo6g01562 154 SUPERFAMILY Pectin lyase-like 23 147 IPR011050 -
Mepo6g01562 154 PANTHER POLYGALACTURONASE QRT3 1 152 IPR039279 GO:0004650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01562 Mepo-Chr6 17171517 17173490 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01562 - - csav:115696984 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g01562 6 17171517 17173490 Mepo6g01562 6 17171517 17173490 ECH