Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01527 ATGAAAGTATCAACACTTTCTCTCTTATGCTTCTTCTCTTGTGTTCTATTAGTCCTTTGTCATGAAAATGAAATAAGTACTTTGAAAGTGCTTTTAGAGGTGAAATCATCTTTCACAGAAGACCCTGAAAATGTTCTTGGTAATTGGTCTGAAAACAACACTGATTACTGTACTTGGAGAGGTATTTCATGTGACTCGGTGAGTCGTGACGTAGTTAGACTCGTCCTGTCCAACTCGAAACTCAGCGGGTCAATTTCACCTTCACTCGGTCTTTTACAAAACCTAACTCACCTTGATCTTTCATCAAATCATCTTGTGGGTCCCATTCCAACTTCTCTCTCCAAACTCACTAAATTAGAATCTTTGCTTTTGTTCTCCAACCAACTTACAAGCCAAATTCCTGCTGAGTTTGGCTCGTTGGTGAATCTCCGATTTTTGCGACTCGGTGACAATCAACTCAGTGGTCAAATTCCTTTTTCATTAGGCAATCTTGTTAAACTTGTCACCCTTGGTTTAGGTTCATGTAAACTCAACGGTTCGATTCCGGGTCAACTCGGTCGACTCACTGAGTTAAAGAATCTCATTCTCCAAGACAACAAGTTAACCGGTTCTATTCCATCCGAGTTAGGCAACTGTTCAAGCCTCATCAACTTCACTGGAGCTGAAAACGAACTCAATGGAACAATCCCGACTCAACTGAGTCAACTCAAAAACCTTGAAGTTCTCAACCTTGCCAACAATTCCTTAACAGGTGAATTACCGAGTCAACTCAGTGAAATGAGTAAACTCGAATATCTCAATGTGATGGAAAACAAACTCGAGGGTCACATTCCAATCTCTCTGTCTCAATTGAGTAACCTTGAAGATCTTGACTTGTCAATGAACAAATTCAGTGGAGGAATTCCAAAAGAGTTTACCAACATGTCTAGGTTACAATACTTAGTTCTTTCTGGTAACTCTTTATATGGAAATATTCCAAAAACTTTATGTTATAATGCAAAAAGTTTAGAGCATTTATTTATATCTAAGAGTGGACTTCATGGTGAAATTCCATCTGAGTTGAGTCAATGTAAATCGTTGAAGCAAATTGATTTATCAAACAATTATCTCAATGGAACAATACCTCTTGAGATTTATGGTTTGGTGAATTTAACTGATTTTTTGCTTCATAACAATAGTTTGGTTGGTTCAATTTCACCTTTCATAGGGAATTTGAGTAACATGCATACACTTGCATTGTATCATAACAAGTTGCATGGTGCTTTGCCTAAAGAGATTGGGAAGCTTGGAAAGTTGGAGATTTTGTTTCTTTATGATAATCAGTTTTCTGGGGAGATACCTATGGAGATTGGTAATTGTTCAGAATTGCAAATGGTTGATTTCTTTGGGAACCATTTTGGTGGAAGAATTCCAATCACTATTGGAAGGTTGAAAGAGTTGAGTTTTCTTCATCTTAGGCAAAATGATCTTGTTGGTGAGATTCCAGCTACGCTTGGGAATTGTCATAAACTGATTGTGTTGGATTTGGCTGATAATAACCTCTCTGGTGGAATTCCTGCGACGTTCGGGTACCTTAAAGATTTGAAGCAGTTCATGCTTTACAACAATTCTCTTGAAGGTGGTATTCCTCAGCAAATGGTGGATGTAGCAAATTTGACAAGAGTTAATCTTTCAAAGAATAGATTGAATGGAAGTTTGGCTCCATTGTGTAGCTCTAGAGATTTTCTTTCTTTTGATGTCACAGGTAATGCATTTGATGGTGAAATCCCTTCAAATTTGGGAAACTCTTTGTCTCTTAATAGGCTAAGATTAGGTGGTAACAAGTTTTCTGGTGAAATTCCAAGGACATTAGGAAAAATCACTGAATTGTCTTTGTTAGATCTCTCGGGAAATTCACTCATAGGACCAATACCAGGTGAACTATCTTTATGTAACAAACTTGCCTCTATTGATTTAAGCAATAACCTTCTTGTTGGTCATATACCATCATGGCTTGGAAATTTGCCTAAGTTAGGAAAGGTTAATCTTGCCTTCAATCAATTTTCTGGGCCTTTTCCATTAGGCCTATTCAAATTACCTATGTTGTTAGTTCTTTCCTTGAATAACAATTCTCTTGATGGAAGTCTCCCAGATGGTATCGGCGATCTTGAATCGCTTAATGTCTTAAGACTTGACCAGAATAATTTTAGTGGACCAATCCCTCATGCAATAGGTAATTTGAGAAATCTATATGAGCTCAATCTATCTAGAAATGTCTTTAGTGGTGACATACCAAATGAGGTTGGGAATCTTCAAAATCTCCAAGTCGCTTTAGACCTCAGTTACAATAATCTCTCTGGTCAGGTTCCATCTTCTCTTGGCACGTTGGCGAAATTGGAAGCGCTTGCTCTATCTCACAATCAACTCACAGGAGAAGTTCCTTCAAACATCTGTGAAATGATTAGCTTGGAAAAGTTGGATATCTCTTACAATAACTTTCAAGGTGCATTGAATAAGCGATTCTCCCGCTGGCCATACGAGGCGTTTGTAGGGAACCTTCGTCTTTGTGGAGCCTCTCTTGGTAGCTGCAACCATGGTGGTGCTTCCCGTAATAGGCTATCGAGGTTAAGTGAGAAATCAGTGATTATAATATCTGCCTTGTCAACTCTAGCTGCAATTGCACTACTTGTTCTTGCAGTGAAAATCTTCTTGAGAAATAGGCAAGAACTTCTGAAGAAAGACAGTGAATTGGAGTGTGTTTTCTCCTCCTCTTCGTCACAAGTGCAGAAACGACCGTTGTTCCCTGTAAGTGCAGGTGGACGGAGAGAATACAGGTGGCAAGAAATCATGGATGCTACAAACAATTTGAGTGATGAATTCATAATCGGTTCTGGAGGTTCCGGAACAGTCTACAGAGTTGAATTGCCAACCGGCGAGACTGTTGCTGTCAAGAAGATTTCATTGAAAGATGAATATCTGTTGCATAAAAGCTTTATAAGAGAAGTGAAGACTTTAGGGAGGATTAAGCATAGACATTTGGTGAAACTGGTTGGTTGTTGTAGCAATAGACACAAAGGAAATGGCTGCAATCTGTTGATATACGAGTTCATGGAAAATGGAAGTGTTTGGGATTGGTTACATGGAAATGCTCTCAAGTTAAAGAAAAACCTTGATTGGGACACAAGGTTCAAAATTGCTTTGGGGTTAGCTCAAGGAATGGAGTACCTTCATCATGATTGTGTGCCAAAGATCATTCACAGGGACATCAAATCCAGCAATATATTGTTAGATTCCAATATGGATGCTCACTTGGGAGATTTTGGATTGGCAAAAGCAATCATTGAGAGTCTTGATTCTAATACCGAGTCTACTTCTTGTTTCGCAGGATCTTATGGTTACATAGCTCCAGAATTCGGATACTCTTTGAAGGCCACAGAGAAAAGCGATGTATACAGCATGGGAATTGTGCTTATGGAACTTGTTAGTGGTAAATTGCCAACTGATGCAGCATTTAGAGGAGGTGTAGACATGGTGAGATGGGTGGAGACGCACATTAACATGAAAGGAACTGAACGTGAGGAACTCATAGATCCTGAGCTCAAACCCCTCTTACCTTATGAAGAGTTTGCAGCATTTCAAGTGCTTGAGATAGCTATACAGTGCACCAAAACTACACCAATGGAGAGGCCATCATCAAGGCAAGTATGTGATCTTCTTCTACATGTATCCAAGAACAAAAAAGTGGAGTTTGAGAAGATGAAATTGGATTCTTACAACTGA 3759 0.39 MKVSTLSLLCFFSCVLLVLCHENEISTLKVLLEVKSSFTEDPENVLGNWSENNTDYCTWRGISCDSVSRDVVRLVLSNSKLSGSISPSLGLLQNLTHLDLSSNHLVGPIPTSLSKLTKLESLLLFSNQLTSQIPAEFGSLVNLRFLRLGDNQLSGQIPFSLGNLVKLVTLGLGSCKLNGSIPGQLGRLTELKNLILQDNKLTGSIPSELGNCSSLINFTGAENELNGTIPTQLSQLKNLEVLNLANNSLTGELPSQLSEMSKLEYLNVMENKLEGHIPISLSQLSNLEDLDLSMNKFSGGIPKEFTNMSRLQYLVLSGNSLYGNIPKTLCYNAKSLEHLFISKSGLHGEIPSELSQCKSLKQIDLSNNYLNGTIPLEIYGLVNLTDFLLHNNSLVGSISPFIGNLSNMHTLALYHNKLHGALPKEIGKLGKLEILFLYDNQFSGEIPMEIGNCSELQMVDFFGNHFGGRIPITIGRLKELSFLHLRQNDLVGEIPATLGNCHKLIVLDLADNNLSGGIPATFGYLKDLKQFMLYNNSLEGGIPQQMVDVANLTRVNLSKNRLNGSLAPLCSSRDFLSFDVTGNAFDGEIPSNLGNSLSLNRLRLGGNKFSGEIPRTLGKITELSLLDLSGNSLIGPIPGELSLCNKLASIDLSNNLLVGHIPSWLGNLPKLGKVNLAFNQFSGPFPLGLFKLPMLLVLSLNNNSLDGSLPDGIGDLESLNVLRLDQNNFSGPIPHAIGNLRNLYELNLSRNVFSGDIPNEVGNLQNLQVALDLSYNNLSGQVPSSLGTLAKLEALALSHNQLTGEVPSNICEMISLEKLDISYNNFQGALNKRFSRWPYEAFVGNLRLCGASLGSCNHGGASRNRLSRLSEKSVIIISALSTLAAIALLVLAVKIFLRNRQELLKKDSELECVFSSSSSQVQKRPLFPVSAGGRREYRWQEIMDATNNLSDEFIIGSGGSGTVYRVELPTGETVAVKKISLKDEYLLHKSFIREVKTLGRIKHRHLVKLVGCCSNRHKGNGCNLLIYEFMENGSVWDWLHGNALKLKKNLDWDTRFKIALGLAQGMEYLHHDCVPKIIHRDIKSSNILLDSNMDAHLGDFGLAKAIIESLDSNTESTSCFAGSYGYIAPEFGYSLKATEKSDVYSMGIVLMELVSGKLPTDAAFRGGVDMVRWVETHINMKGTEREELIDPELKPLLPYEEFAAFQVLEIAIQCTKTTPMERPSSRQVCDLLLHVSKNKKVEFEKMKLDSYN 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01527 1252 ProSitePatterns Protein kinases ATP-binding region signature. 955 978 IPR017441 GO:0005524
Mepo6g01527 1252 PANTHER UNNAMED PRODUCT 7 568 - -
Mepo6g01527 1252 Gene3D Ribonuclease Inhibitor 375 470 IPR032675 -
Mepo6g01527 1252 Gene3D Ribonuclease Inhibitor 276 374 IPR032675 -
Mepo6g01527 1252 Gene3D Ribonuclease Inhibitor 471 569 IPR032675 -
Mepo6g01527 1252 FunFam Uncharacterized protein 377 470 - -
Mepo6g01527 1252 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 278 376 - -
Mepo6g01527 1252 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 910 1029 - -
Mepo6g01527 1252 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 184 277 - -
Mepo6g01527 1252 Gene3D Phosphorylase Kinase; domain 1 913 1029 - -
Mepo6g01527 1252 ProSiteProfiles Protein kinase domain profile. 949 1237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01527 1252 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Mepo6g01527 1252 SUPERFAMILY Protein kinase-like (PK-like) 926 1232 IPR011009 -
Mepo6g01527 1252 Gene3D Ribonuclease Inhibitor 180 275 IPR032675 -
Mepo6g01527 1252 Gene3D Ribonuclease Inhibitor 26 179 IPR032675 -
Mepo6g01527 1252 Gene3D Ribonuclease Inhibitor 570 863 IPR032675 -
Mepo6g01527 1252 SMART serkin_6 949 1237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo6g01527 1252 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 183 - -
Mepo6g01527 1252 FunFam Leucine-rich repeat receptor-like protein kinase 1030 1249 - -
Mepo6g01527 1252 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 471 567 - -
Mepo6g01527 1252 SUPERFAMILY L domain-like 36 351 - -
Mepo6g01527 1252 SUPERFAMILY L domain-like 573 838 - -
Mepo6g01527 1252 Pfam Leucine Rich Repeat 238 258 IPR001611 GO:0005515
Mepo6g01527 1252 SMART LRR_typ_2 236 260 IPR003591 -
Mepo6g01527 1252 SMART LRR_typ_2 740 764 IPR003591 -
Mepo6g01527 1252 SMART LRR_typ_2 308 332 IPR003591 -
Mepo6g01527 1252 SMART LRR_typ_2 284 307 IPR003591 -
Mepo6g01527 1252 SMART LRR_typ_2 381 405 IPR003591 -
Mepo6g01527 1252 SMART LRR_typ_2 692 716 IPR003591 -
Mepo6g01527 1252 SMART LRR_typ_2 116 139 IPR003591 -
Mepo6g01527 1252 SMART LRR_typ_2 789 813 IPR003591 -
Mepo6g01527 1252 SMART LRR_typ_2 477 501 IPR003591 -
Mepo6g01527 1252 SMART LRR_typ_2 140 164 IPR003591 -
Mepo6g01527 1252 SMART LRR_typ_2 92 115 IPR003591 -
Mepo6g01527 1252 SMART LRR_typ_2 188 212 IPR003591 -
Mepo6g01527 1252 SMART LRR_typ_2 429 453 IPR003591 -
Mepo6g01527 1252 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 568 859 - -
Mepo6g01527 1252 Gene3D Transferase(Phosphotransferase) domain 1 1030 1251 - -
Mepo6g01527 1252 Pfam Leucine rich repeat 262 321 IPR001611 GO:0005515
Mepo6g01527 1252 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Mepo6g01527 1252 Pfam Leucine rich repeat 741 802 IPR001611 GO:0005515
Mepo6g01527 1252 Pfam Leucine rich repeat 504 562 IPR001611 GO:0005515
Mepo6g01527 1252 SUPERFAMILY L domain-like 301 609 - -
Mepo6g01527 1252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1077 1089 IPR008271 GO:0004672|GO:0006468
Mepo6g01527 1252 Pfam Protein kinase domain 954 1229 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01527 Mepo-Chr6 16750461 16754601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01527 561 830 Receptor kinase-like Gene Family AT1G73080 33.444 3.19e-32 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo6g01527 Pkinase 7.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01527 - - gmx:100797153 1720.67