Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01526 ATGGCTTCTTCTGGTGTTGAAATTGCGACTTCTTCACCGTTTGGTTGTGTTCTAAGGGACCGTAATCATCGTGATGGATGCAGAGAAAGTAGCAAAGTTAAGGCTACACATGCTGTTTTCCAAAGGAACATCAAGAACTTTGTCATGGACCACCTTAACACGTGCATTACCATGTCTTCTGATTCTGCAACAAACGAAAACAACAATGAGAGTCAAATGAAGAACAACAACAATAACAATGTTTCTTCTTGGGCTTCAAAAGGTAGCACCAATCTTGCAAGGCTTCGTTTGAAGAGAAATAATCACAATGGCATCATCAACAACAATAAGGATAACGAAAATGAGCCATCCTTGGCTTCGTTGATTAGCCCGAGACATTCGCGCCTTCTTGATCGATGGGCTGCGAGACAAGCTCATGAGATGGTGTCAAATTTGGAGAATGAAGCTGAATTGTTGTCCATTGATGATAACACTAACAATAACAATGACATGCCTGCAGTTGTAAGGACGTCTAGTTCTACCTCGGATGAATGTTCTTCGGAGAAATTGAACCTTGGTGCGTCTTCCCTTGTTCAATTATGGGAAAAGAGGCTTAACAATTCAAATGGATCCAAACCAAACACTCCAATGGAGAAAACAAGTCCAACTGGTGTGACAAGTGCAACTTGCAACAATGAGAATGTGTTTGTTGTTAACACTCCAATTGAGAAAACAAGTCCAACTGGTGGTACAAGTGCAACTTGCAACAATGTGAATGTGTTTGTTGTGGAAGAACAAAGAGGGTCGGAACTAGGAGAGGGTTTTGAAGGACCGTTATCATCAGGGAATGAAGAATCGTTTTCGTTTTCTTCGTTCACTGATTGGGAATCTGATAAGACAGGTGATCAGAGTAGGTTGTGTTCAGTTGATCAAAGTAGGAAGAATTCGTCGGAAAGTGATAGAGTTAGTGTTGCTGATATCATAAAGAAACTCACTGCTACAAGTCAAACACAGAGTTCACCTCCATCTTCTGGTGATGACAATGATCATGAAGGATGTGGTGGCGGCAGCGTGGCAAGTTCTCCTCGTAAAGATTTTGCACCAGAACTGTCAGAACAAAGAGCCTTTCCTCAGGTTACTTGTTCAACACGAATTAGAGGACGTCAAGCTTTCAATGATTTGCTTATGCAGTTGGAGCGTGATAGGTATGGAGAGCTAAAGAACTTGGCTGAACGTGGAACTGTCTCCAAGTTCACACAAAAAGGTCGCATTCAGGCATTACTTCGACTTAAATTGTTACGTGGCGTGGCAGCTAATGTTCCATCACACCAGAAATCAACATCATCTGAAGTAAACAGACGAGTACAACCACACAGATCTGCAATCATGCAACTAAGGAGAAATTTTAGCACTAGGGTTGAAAAAAGGAATACAGTACAGGAAGAAGTAGCAAACACACGAAGTCCTCCCAAAGAGATAGTAAACAACATCACACAATTAGAAAACTCTACCACTGCTGATCAAATCAGCAAAGACACAAGCGGCCAGATTAGTGAAGAAGATCATCCAAGCTCAACTGTCATGTCTCAAGAAACATGTTTTGAGGCTCAGCGTGATTACTCTGAGGAAACTTCTGAGGAAACTACGTCTATAACTGATTCAAATCTTAAGGAGAAAGAGGAAATTAACCAGCAAAATGATGAAACCAGTTATGATTGTGCAGTAGAAGAGGAAGGAAGTAACCAGAACTATGCTGAAAGCAGTTATGAAGAGATGGTGGAAGAGAATTATGATGAAAATAATTATGACTGGATCAGTGAAATTTCTCGACCAAGAAGCTATTGGGAAGAGCGGAGGCAAGCATGGTATAGAGAAATGCTTGACACCGGTTCTCCAAATGAAGATATACAAGTGCTTCTTCAACGAAGAACAGTTTCAACATTCCTTTCTAGTGGCTTCCGCGAAACAATGGATAGGTTGATGCAATCTCATAGAGGAACACAGACACATCTAGTTAGTAGTCAAGATGATGAGATAGACAATGAAGGGTTGATGGCGTTTTTCCAAGAACACTTGTATCCTGTAAGATCTCCTCAAGAAAATGAAACAGAGAGAACGGTAGACGAAGAAGAGGAAAGGGTAAATGAGGACGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGATGAGAAAGAGCATGAAGAGGAGCAAGGAGGGGAGAGCTTTGTTAGTAGTAGCTTGGTTAGTAGTTTGTGTCATGAAGTCGGAGACTATTCTAATCAATCCTCATCATGGAGTTATAGAGACAATGAAGCTGGTGATGATTTTGATAGAGTTGCTTCTACATCTTCACAACCTTATCCATCTCAGTCTTCCTATCATGATAATCGGCCAAACTCCTCATCGACCAACCATCATTCAATTGAAATGGATCTCATATATGATATGAGAGGCCATATGGAGCAACTTTATCAAGAAATGAGTGAACTAAGGAAATCAATAAAGAGTTGCATGGATATGCAGATGCAGATGCAGTTACAAAAATCCAATAACCAAAGGGTGCAAACAGCTGAAAAAGAAGAAAAGAAGTCACATAACAAGACTGGTAAGAAAGGAAACTGCTGCATTTGCAATGAGATGAAAGTTGACTCAGTTCTATACAGGTGTGGACACATGTGTGCATGTCTGAAATGTGCCAATGATTTACGGTGGAACAATGGAAAATGTCCAATATGTCGCGCTAAAATAGACGATGTTGTTCGAGTTTATCTTGATGTATAG 2778 0.4107 MASSGVEIATSSPFGCVLRDRNHRDGCRESSKVKATHAVFQRNIKNFVMDHLNTCITMSSDSATNENNNESQMKNNNNNNVSSWASKGSTNLARLRLKRNNHNGIINNNKDNENEPSLASLISPRHSRLLDRWAARQAHEMVSNLENEAELLSIDDNTNNNNDMPAVVRTSSSTSDECSSEKLNLGASSLVQLWEKRLNNSNGSKPNTPMEKTSPTGVTSATCNNENVFVVNTPIEKTSPTGGTSATCNNVNVFVVEEQRGSELGEGFEGPLSSGNEESFSFSSFTDWESDKTGDQSRLCSVDQSRKNSSESDRVSVADIIKKLTATSQTQSSPPSSGDDNDHEGCGGGSVASSPRKDFAPELSEQRAFPQVTCSTRIRGRQAFNDLLMQLERDRYGELKNLAERGTVSKFTQKGRIQALLRLKLLRGVAANVPSHQKSTSSEVNRRVQPHRSAIMQLRRNFSTRVEKRNTVQEEVANTRSPPKEIVNNITQLENSTTADQISKDTSGQISEEDHPSSTVMSQETCFEAQRDYSEETSEETTSITDSNLKEKEEINQQNDETSYDCAVEEEGSNQNYAESSYEEMVEENYDENNYDWISEISRPRSYWEERRQAWYREMLDTGSPNEDIQVLLQRRTVSTFLSSGFRETMDRLMQSHRGTQTHLVSSQDDEIDNEGLMAFFQEHLYPVRSPQENETERTVDEEEERVNEDEEEEEEEEEEEEEEEEKDEKEHEEEQGGESFVSSSLVSSLCHEVGDYSNQSSSWSYRDNEAGDDFDRVASTSSQPYPSQSSYHDNRPNSSSTNHHSIEMDLIYDMRGHMEQLYQEMSELRKSIKSCMDMQMQMQLQKSNNQRVQTAEKEEKKSHNKTGKKGNCCICNEMKVDSVLYRCGHMCACLKCANDLRWNNGKCPICRAKIDDVVRVYLDV 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01526 925 MobiDBLite consensus disorder prediction 274 290 - -
Mepo6g01526 925 MobiDBLite consensus disorder prediction 62 86 - -
Mepo6g01526 925 MobiDBLite consensus disorder prediction 496 522 - -
Mepo6g01526 925 Coils Coil 693 736 - -
Mepo6g01526 925 MobiDBLite consensus disorder prediction 776 804 - -
Mepo6g01526 925 SUPERFAMILY RING/U-box 872 917 - -
Mepo6g01526 925 MobiDBLite consensus disorder prediction 775 804 - -
Mepo6g01526 925 Pfam Zinc finger, C3HC4 type (RING finger) 870 918 - -
Mepo6g01526 925 Coils Coil 819 839 - -
Mepo6g01526 925 MobiDBLite consensus disorder prediction 697 732 - -
Mepo6g01526 925 Coils Coil 135 155 - -
Mepo6g01526 925 CDD mRING-HC-C3HC5_NEU1 870 922 - -
Mepo6g01526 925 MobiDBLite consensus disorder prediction 322 339 - -
Mepo6g01526 925 ProSiteProfiles Zinc finger RING-type profile. 873 912 IPR001841 -
Mepo6g01526 925 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 845 924 IPR013083 -
Mepo6g01526 925 MobiDBLite consensus disorder prediction 262 366 - -
Mepo6g01526 925 PANTHER BNAC05G24000D PROTEIN 1 924 - -
Mepo6g01526 925 MobiDBLite consensus disorder prediction 684 747 - -
Mepo6g01526 925 MobiDBLite consensus disorder prediction 198 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01526 Mepo-Chr6 16733570 16738281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01526 865 921 C3H Transcription Factor Family AT3G06140 35.088 1.31e-07 52.8