Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01503 ATGGATCATGTAAGGGATGTGAGTAGTGTAGTGGGGACTGTGCTGACTCCGATGCGGTTTGTTTGGCCATATGGTGGAAGTAGTGTTTTTCTCAGTGGTTCTTTCACACGGTGGTCTGAGCTTTTGCCAATGTCTCCAGTGGAAGGTTGCCCAACAGTGTTTCAAGTTATTTACAGATTGCCCACTGGTTACCATCAGTACAAGTTTTTTGTTGATGGAGAATGGCGGCACGATGAGCATCAACCTTATGTACATGGACAATATGGGATAGTCAACACTGTCTTATTGGTTACTGATCCTAACTACATACCTGTTATAACTTCAGACATTGCTTCAGGAAATAACATGGATGTGGATAATGAGACTTTTCGCCGCATGGTCCGGGTGACAGACGGTACATTGGACGAGGTGCTTCCAAGAATATCAGATACTGATGTACAAATCTCTCGTCAGCGTATTTCTGCGTTTCTGTCTATGCACACAGCTTATGAATTACTTCCCGAGTCAGGCAAGGTTGTTGCATTGGATGTTGATTTACCAGTGAAACAAGCATTTCATATATTACATGAGCAGGGAATATACATGGCTCCTCTCTGGGACATTTGCAAGGGGCAATTTGTTGGTGTTCTTAGTGCTTTGGATTTTGTTTTAATTTTAAGGGAGTTGGGGAACCGTGGATCTAATCTGACAGAAGAGGAGCTTGAAACACATACCATATCGGCTTGGAAAGAAGGAAAACCATATCTCAACAGACAGATCAATGGACATGGAACTGCATTTTCTAGACATCTTATCCATGCAGGGCCATATGATAATTTGAAAGATATCGCCATGAAGGTCTTGCAAAAGGAGGTTTCAACAATTCCTATTATCCATTCGTCTTCTGAAGACGGTTCTTCTCCACAGTTATTGCATCTTGCTTCACTTTCAGGAATACTCAAATGCATTTGTAGGTATTTTAGGCATTGCTCTAGTTCATTGCCAATACTACAACTTCCAATCTGTGCAATACCTGTGGGCACATGGGTGCCCAAAATCGGGGAATCAAAACGGCGGCCTCTAGCAGTGCTGAGACCAAGCTCATCCCTTGCTTCAGCCCTAAATTTATTAGTTCAAGCCCAAGCAAGTTCAATACCAATCGTTGATGACAATGACTCACTACTGGATATATATTGTCGGAGTGATATAATGGCTTTGGCAAAGGACAGGGCATATACACATATCAATCTTGATGAAATGACTGTTCAACAGGCTTTGCAGTTGGGCCAGGACGTGTGTAGTCCCTACGAGCTGAGAAGCCAAAGGTGTCAGATGTGTTTGCGTTCTGATTCACTGCATAAAGTGATTGAGCGTTTGGCAAATCCAGGTGTGAGGCGGATTGTCATTGTGGAAGCTGGTAGTAAGCGTTTAGAAGGCATTGTCTCATTGAGTGACATATTCAAGTTCTTTCTCGGTTAG 1458 0.4294 MDHVRDVSSVVGTVLTPMRFVWPYGGSSVFLSGSFTRWSELLPMSPVEGCPTVFQVIYRLPTGYHQYKFFVDGEWRHDEHQPYVHGQYGIVNTVLLVTDPNYIPVITSDIASGNNMDVDNETFRRMVRVTDGTLDEVLPRISDTDVQISRQRISAFLSMHTAYELLPESGKVVALDVDLPVKQAFHILHEQGIYMAPLWDICKGQFVGVLSALDFVLILRELGNRGSNLTEEELETHTISAWKEGKPYLNRQINGHGTAFSRHLIHAGPYDNLKDIAMKVLQKEVSTIPIIHSSSEDGSSPQLLHLASLSGILKCICRYFRHCSSSLPILQLPICAIPVGTWVPKIGESKRRPLAVLRPSSSLASALNLLVQAQASSIPIVDDNDSLLDIYCRSDIMALAKDRAYTHINLDEMTVQQALQLGQDVCSPYELRSQRCQMCLRSDSLHKVIERLANPGVRRIVIVEAGSKRLEGIVSLSDIFKFFLG 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01503 485 Gene3D - 341 485 IPR046342 -
Mepo6g01503 485 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 145 483 - -
Mepo6g01503 485 FunFam Sucrose nonfermenting 4-like protein 13 98 - -
Mepo6g01503 485 ProSiteProfiles CBS domain profile. 431 485 IPR000644 -
Mepo6g01503 485 ProSiteProfiles CBS domain profile. 165 227 IPR000644 -
Mepo6g01503 485 SMART cbs_1 435 484 IPR000644 -
Mepo6g01503 485 SMART cbs_1 353 401 IPR000644 -
Mepo6g01503 485 SMART cbs_1 171 220 IPR000644 -
Mepo6g01503 485 SUPERFAMILY E set domains 16 98 IPR014756 -
Mepo6g01503 485 SUPERFAMILY CBS-domain pair 350 484 IPR046342 -
Mepo6g01503 485 Gene3D - 142 325 IPR046342 -
Mepo6g01503 485 ProSiteProfiles CBS domain profile. 350 406 IPR000644 -
Mepo6g01503 485 SUPERFAMILY CBS-domain pair 152 322 IPR046342 -
Mepo6g01503 485 Gene3D Immunoglobulins 16 109 IPR013783 -
Mepo6g01503 485 Pfam Glycogen recognition site of AMP-activated protein kinase 17 100 IPR032640 -
Mepo6g01503 485 CDD E_set_AMPKbeta_like_N 17 97 - -
Mepo6g01503 485 Pfam CBS domain 351 398 IPR000644 -
Mepo6g01503 485 Pfam CBS domain 437 484 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01503 Mepo-Chr6 16468694 16480435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01503 25 128 Protein tyrosine phosphatase (PTP) family AT3G52180 28.037 4.49e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01503 - - gmx:100785692 846.269