Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01493 ATGATCAGCCATGAATGGCAGATAAGGGAGAATGTATACGGTCTGTCCCAGAGAATCCTACATCATCAGACATCTCTCTTCTTCAACCGTCATATTGACCACATCATTGTGTGTTGCTTCTATGTAGTCGCAAAGATTTCAAAACCGAGCCTGAGTTTTAAGGAGATTATAGGAAGCTATAAGAAGCAACCACGGTGCAACCCACGTGTTTTTGATAGCGTATTTGTCGATTGGTCATTGGCATGCCAGGACCCAGAATCTTGTAAAATAATAGGACATGAGCATGTCGACATTGTTACATTCTGCAATGATATATTTGTTCCTTCTGTAGAGCCACTGCTTTTGGAACTTGGCGCTAAAGGGGAAGCTGTGAAAAGTTGCTGA 384 0.4219 MISHEWQIRENVYGLSQRILHHQTSLFFNRHIDHIIVCCFYVVAKISKPSLSFKEIIGSYKKQPRCNPRVFDSVFVDWSLACQDPESCKIIGHEHVDIVTFCNDIFVPSVEPLLLELGAKGEAVKSC 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01493 127 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 4 118 IPR028309 GO:0006357|GO:0051726
Mepo6g01493 127 Pfam Retinoblastoma-associated protein B domain 6 110 IPR002719 GO:0005634|GO:0051726
Mepo6g01493 127 SUPERFAMILY Cyclin-like 7 118 IPR036915 -
Mepo6g01493 127 Gene3D - 1 126 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01493 7 118 Core Cell Cycle Gene Families AT3G12280 58.929 2.21e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Mepo6g01493 RB_B 1.1e-26 CL0065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo6g01493 K04681 - gmx:100777429 157.532