Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01484 ATGTCTTCTTCTGCATGGCTAACTTCTCCTTCATGCACCCTTTTACCAATAGAATCATCTTCCTCTACACCAAAACTCATACTTCAATGGTTAACCTTTCTTTGCCTATCTCCATGTCCTCAGAGACTTCTTCTTTCTTCTCTTGATTCCTTGTTTTTGCTCTTTCTCTTAGCTTTTGCGGCTCAAAAACTCTATTCAAGATTCTATTCAAGAGCAAACACTAGCTCCTCAATCACCAAACCCCTTCTGCAGGAGAAAGATTCTGACTATAAAATCACCTTTTTGTTCAAACTAGCCTTTTTGGTAACAACCCTTTTGGCTATAACTTACACTGTTCTAGGAATCTTGGCTTTCACTCAAACCAATAACCTATCTTCATGGAAACAAATAGAAGCACTTTTTCGGTTGTTTCAAGCAATAACCAACATAGTCATAGTGATTCTAATGATACATGAGAAAAAGTTCAAATCTTCCAAACACCCTTTATCACTAAGAATCTATTGGATAGCAAACTTTGTGATTGCTACTTTGTTTGCTACTTCGGCTATTGTTCGATTGATAACTGTCGGTGAAGAAAAGTTGGAGCTTAGTTTGCGAATAGATGACATATTCTCATTGGTTAATCTTCCATTATCTGTGTTCTTTTTTGTGATATCAATAAAAGGGTCATCGGGTATTCATGTGATAAGAATATCCGATGTAGTAGCAACATATCCATCGATTTCAATCGATAGAACTTTGAGTCCTTATGCTTGTTCTTCATTTTTGTCCAAAACAGTTTGGTATTGGCTGAATCCTTTGCTTAATAAAGGTTACCAAACACCCCTTAAACTAGAAGATGTACCTTCACTTCCTATTGATTTTAGAGCAGAAAAAATGTCAGAACTTTTTCAAAACAATTGGCCAAAACCAGAGGAAAACAGTAAGCATCCAGTTGGAGTTACCCTTTTTAGGTGTTTTTGGAAACACATAGTTTTCACTGGCTTTCTTGCATTCTTAAGGCTTTGTGTTATGTATGTCGGTCCATTGCTGATTCAGAGTTTTGTTGATTTCACATCACAGAAAGATAGTCCGACTAGTGAAGGTATTGTTTTGATATGTGTCCTTTTTGCAGCAAAATCAGTTGAAGTACTTAGTGTTCATCAATTCAACTTCCATTCTCAGAAACTAGGTATGCTTGTTCGCTCGAGCATAATCACTTCGGTTTACAAAAAGGGTTTAAGGTTGTCAAGTTCTTCAAGACAAGCTCATGGAACTGGACAGATTGTGAATCACATGGCTGTTGATGCTCAACAACTCTCAGATTTGATGAAGCAGTTTCATCCTATTTGGATGATGCCATTACAAGTTGCCGCTGCATTGGCTCTTATGTATAGCTATGTTGGTTTATCTGTCGTTGCAGCAATTCTTGGTACTGCCATTGTCTTTTGCTTCACTGCATATCGATCGAAGAATAGTAATAGTTTTCAGTTTCGGATAATGGTGAGCCGCGATTCGAGAATGAAGTCGACGAACGAGTTGCTTAACAACATGCGTGTGATTAAATTTCAAGCGTGGGAAGAGTACTTCGGGAACAAGATTCAACAGTTTCGTGAAGCCGAACATGGATGGATTGGGAAATTCTTGTACTATTTTGCTGTTAACATGGGAGTTTTGACTACTTCTCCTTTAGCTATAACTGTTCTTACATTTGGAGCTGCAACTTTTATGGGAATTCCTCTGAGTGCTGGCACTGTTTTCACAGTAACTGCAGTGATCAAGATACTTCAAGAGCCTATGAGTACTTTTCCACAGGCTCTTATCAATATTTCGCAAGCAACAATATCATTAGGGAGGTTGGATAAGTTCATGATGAGTAAGGAAATGGATAAAAATGCAGTGCAAAGAGAGGAGAATTGTGATGATGATGTAGCTGTGGAGATAAAAGATGGGAAATTTTCTTGGGATGATATGGATGAGAATGAGGCTTTGCGAGTTAAGGAGTTGGTGATTAAGAAAGGTGACCATGCTGCTGTTGTAGGAACTGTTGGATCAGGCAAGTCTTCATTATTGGCTTCTGTGTTGGGGGAAATGTTCAAGATCTCAGGAAAGGTTAGAGTTTGTGGGACGACGGCATATGTAGCACAAACATCATGGATTCAGAATGCAACCATCAAAGAAAACATATTGTTTGGTTTACCAATGAACATGGAAAAGTACAAGGAAGCTCTAAGAGTGTGCTGCCTTGAAAAGGATCTTGAAATGATGGAAGATGGTGACAAAACCGAGATTGGAGAGCGCGGTATTAACCTCAGTGGCGGCCAGAAACAGCGCATACAACTTGCTAGAGCTGTATATCAGGACAGTGACATCTATCTCCTTGATGATGTATTCAGTGCTGTTGATGCTCAAACAGGATCATTTATTTTTAAGGAGTGTATCATGGGAACTCTCAAAGATAAGGCAGTTTTACTTGTAACACACCAAGTTGATTTCTTGCATAATGTTGACTCTATAATGGTGATGCGAGAAGGGAGAGTAGTGCAAAGTGGAAAGTATGATGAACTTCTCAAAGCAGGCCTAGATTTTGGTGCACTTGTAGCTGCTCATGAATCCTCAATGGAAATGGCAGAAACAAGTGAGAAAACTAGTGATGATTCTGCTCAATCTCCGAAACTCGCCCGCGTCGTTTCGAAAGAAAAAGAAAGCGGAGAAAAACAGTCTTCTCAAATTCAATCCAAGTCTGATAAAACTGCAGCAAAGCTCATTGAAGATGAGGAAAGAGAAATTGGACGAGTGAATCTTGAAGTATACAAAGACTATTTCACAGAAGCATTTGGGTGGTGGGGATTAGCATTAATGGTAGCAATATCAGTGGTTTGGATGCTGTCATTTTTGGTTGGTGATTATTGGCTAGCAATTGCTACTGCAGATGATTCTGCCATTTCCTCTTTCACTTTCGTTACTGTCTATGCTGTTATAGCTGTTGTGTCATGTATAGTGGTTATGGCAAGAGCTTTCTTTTTTACATATTGGGGTTTAAAGACATCTCAAAGCTTCTTCATTGGAATGCTTCAAAGTATCCTTCATGCACCAATGTCATTCTTTGATACTACTCCTTCTGGCAGAATTTTGAGTCGTGTATCTACCGATCTACTTTCCCTGGATATACAAATTCCAATCTTTGTAAACTTGGTGACGACAACATTAGTAGGATTATTCAGTATCCTCGTAGTCACGTGCCAGAATTCTTGGGAGACCGTCTTCCTATTAATTCCACTGTTTTGGCTCAGCAACTGGTATAGGAAATATTATCTTGCAACTTCTAGGGAATTGACTCGACTTGATTCAATCACAAAAGCTCCAGTGATTCATCACTTTTCAGAGACCATTTCTGGTGTTATGACAATCCGTAGCTCAAGAAAGCAGAATGCATTTTCTCAAGAAAATGTTGACAGGGTGAATGCAAGTCTAAGAATGGATTTTCATAACAATGGTGCAAACGAATGGCTTGGTTTTCGCTTGGACTATATGGGAGTGACTTTCCTTTGCATTGCCACGCTTTTTATGATCTTTTTGCCAAGTGCTATTGCTAGGCCAGAATATGTTGGTATGTCTTTATCCTATGGCCTGGCTCTGAGTGGTGTCTTGTCGATTACCATATCTATGACTTGCAATGTTGAGAACAAAATGGTTTCAGTTGAGAGGATAAAACAGTTTACTAACCTCGCATCAGAAGCTCCATGGAAAATTGCTGACAAGTCTCCTCCTCAGAACTGGCCTAGTCATGGAACTATAGAGCTACATAATTTACAGGTTAGGTATAGGCCAAACACTCCTCTAGTTCTTAAGGGAGTCTCTCTAACAATTGAAGGTGGAGAAAAAGTCGGTGTTGTTGGCCGTACAGGAAGTGGAAAATCAACACTGATTCAAGTGTTATTTAGGTTGATTGAGCCTTCAGCTGGAAAAATAATCATTGATGGTATTAACATTTCCAATGTTGGTCTTCATGATTTGAGGTCACGTTTTGGAATTATTCCACAAGAGCCTGTCCTCTTTCAAGGAACAGTAAGAACCAACATTGATCCTCTTGGATTGTATTCAGAAGAAGAAATTTGGAAGAGTCTTGAGCGGTGCCAATTGAAAGAAGCTGTGGCTGCAAAGCCTGAGAAACTTGACGCTTTAGTGGTTGATGGCGGAGACAATTGGAGTGTGGGGCAGAGGCAACTTCTATGCTTGGGACGGATCATGTTAAAACGCAGCAAAATATTATTCATGGATGAAGCAACAGCATCAGTTGATTCACAAACAGATGTTGTATTACAGAAGATCATCAGAGAAGACTTTGCAGATCGTACAATTGTTAGCATTGCTCACAGAATACCAACAGTTATGGATTGTGACAAGGTTTTGGTCATAGATGAAGGTTTTGCAAAGGAATATGACAAGCCCTCACGTTTGCTTGAAAGGCATTCACTTTTTGCAGCATTGGTTAAGGAGTATTCTAATAGATCAGCTTAA 4500 0.3927 MSSSAWLTSPSCTLLPIESSSSTPKLILQWLTFLCLSPCPQRLLLSSLDSLFLLFLLAFAAQKLYSRFYSRANTSSSITKPLLQEKDSDYKITFLFKLAFLVTTLLAITYTVLGILAFTQTNNLSSWKQIEALFRLFQAITNIVIVILMIHEKKFKSSKHPLSLRIYWIANFVIATLFATSAIVRLITVGEEKLELSLRIDDIFSLVNLPLSVFFFVISIKGSSGIHVIRISDVVATYPSISIDRTLSPYACSSFLSKTVWYWLNPLLNKGYQTPLKLEDVPSLPIDFRAEKMSELFQNNWPKPEENSKHPVGVTLFRCFWKHIVFTGFLAFLRLCVMYVGPLLIQSFVDFTSQKDSPTSEGIVLICVLFAAKSVEVLSVHQFNFHSQKLGMLVRSSIITSVYKKGLRLSSSSRQAHGTGQIVNHMAVDAQQLSDLMKQFHPIWMMPLQVAAALALMYSYVGLSVVAAILGTAIVFCFTAYRSKNSNSFQFRIMVSRDSRMKSTNELLNNMRVIKFQAWEEYFGNKIQQFREAEHGWIGKFLYYFAVNMGVLTTSPLAITVLTFGAATFMGIPLSAGTVFTVTAVIKILQEPMSTFPQALINISQATISLGRLDKFMMSKEMDKNAVQREENCDDDVAVEIKDGKFSWDDMDENEALRVKELVIKKGDHAAVVGTVGSGKSSLLASVLGEMFKISGKVRVCGTTAYVAQTSWIQNATIKENILFGLPMNMEKYKEALRVCCLEKDLEMMEDGDKTEIGERGINLSGGQKQRIQLARAVYQDSDIYLLDDVFSAVDAQTGSFIFKECIMGTLKDKAVLLVTHQVDFLHNVDSIMVMREGRVVQSGKYDELLKAGLDFGALVAAHESSMEMAETSEKTSDDSAQSPKLARVVSKEKESGEKQSSQIQSKSDKTAAKLIEDEEREIGRVNLEVYKDYFTEAFGWWGLALMVAISVVWMLSFLVGDYWLAIATADDSAISSFTFVTVYAVIAVVSCIVVMARAFFFTYWGLKTSQSFFIGMLQSILHAPMSFFDTTPSGRILSRVSTDLLSLDIQIPIFVNLVTTTLVGLFSILVVTCQNSWETVFLLIPLFWLSNWYRKYYLATSRELTRLDSITKAPVIHHFSETISGVMTIRSSRKQNAFSQENVDRVNASLRMDFHNNGANEWLGFRLDYMGVTFLCIATLFMIFLPSAIARPEYVGMSLSYGLALSGVLSITISMTCNVENKMVSVERIKQFTNLASEAPWKIADKSPPQNWPSHGTIELHNLQVRYRPNTPLVLKGVSLTIEGGEKVGVVGRTGSGKSTLIQVLFRLIEPSAGKIIIDGINISNVGLHDLRSRFGIIPQEPVLFQGTVRTNIDPLGLYSEEEIWKSLERCQLKEAVAAKPEKLDALVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDVVLQKIIREDFADRTIVSIAHRIPTVMDCDKVLVIDEGFAKEYDKPSRLLERHSLFAALVKEYSNRSA 1499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01484 1499 FunFam ABC transporter C family member 3 1242 1493 - -
Mepo6g01484 1499 CDD ABCC_MRP_domain2 1257 1477 - -
Mepo6g01484 1499 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 252 1495 - -
Mepo6g01484 1499 SMART AAA_5 1285 1469 IPR003593 GO:0016887
Mepo6g01484 1499 SMART AAA_5 666 847 IPR003593 GO:0016887
Mepo6g01484 1499 Pfam ABC transporter transmembrane region 326 593 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g01484 1499 Pfam ABC transporter transmembrane region 949 1185 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g01484 1499 CDD ABCC_MRP_domain1 639 839 - -
Mepo6g01484 1499 Pfam ABC transporter 662 790 IPR003439 GO:0005524
Mepo6g01484 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1248 1492 IPR027417 -
Mepo6g01484 1499 SUPERFAMILY ABC transporter transmembrane region 941 1237 IPR036640 GO:0005524|GO:0016020
Mepo6g01484 1499 FunFam ABC transporter C family member 4 622 881 - -
Mepo6g01484 1499 ProSitePatterns ABC transporters family signature. 764 778 IPR017871 GO:0005524|GO:0016887
Mepo6g01484 1499 CDD ABC_6TM_ABCC_D2 944 1234 IPR044726 GO:0140359
Mepo6g01484 1499 Gene3D - 1242 1493 IPR027417 -
Mepo6g01484 1499 CDD ABC_6TM_ABCC_D1 326 613 IPR044746 GO:0140359
Mepo6g01484 1499 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 639 862 IPR003439 GO:0005524
Mepo6g01484 1499 MobiDBLite consensus disorder prediction 869 911 - -
Mepo6g01484 1499 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 325 605 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g01484 1499 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 941 1222 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g01484 1499 Gene3D ABC transporter type 1, transmembrane domain 906 1240 IPR036640 GO:0005524|GO:0016020
Mepo6g01484 1499 Gene3D ABC transporter type 1, transmembrane domain 314 622 IPR036640 GO:0005524|GO:0016020
Mepo6g01484 1499 FunFam ABC transporter C family member 5 907 1240 - -
Mepo6g01484 1499 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1259 1493 IPR003439 GO:0005524
Mepo6g01484 1499 Gene3D - 633 865 IPR027417 -
Mepo6g01484 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 637 858 IPR027417 -
Mepo6g01484 1499 FunFam ABC transporter C family member 10 308 621 - -
Mepo6g01484 1499 Pfam ABC transporter 1276 1424 IPR003439 GO:0005524
Mepo6g01484 1499 SUPERFAMILY ABC transporter transmembrane region 315 613 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01484 Mepo-Chr6 16160330 16169606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01484 639 888 Calmodulin-binding Proteins AT2G36910 30.403 9.11e-27 117