Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01483 ATGTCTTCTTCTTCATGGCTAACTTCTCCTTCATGCACCCTTTTACCTGTAGATTCATCTTCCTCTACACCAGAACTCATAATTCAATGGTTAAGGTTCATTTTGCTATCTCCATGTCCTCAGAGGCTTCTTCTTTCTGCTCTTGATTCCTTGTTTTTGCTCTTTCTCTTAGCTTTTGCAGCTCACAAACTCTATTCAAGATTCAATTCAAGAGCAAACACTAGCTCCTCAATCACAAAACCACTTCTGCAGGAGAAAGATTCTGACTATAGAATCACCTTTTGGTTCAAACTAGCCTTTTTGGTAACTACCCTTTTGGCTATAACTTACACTGTTCTAGGAATCTTGGCTTTCACTCAAACCAATAACCTTTCTTCATGGAAACAAATAGAAGCACTTTTTCGGTTGTTTCAAGCAATAACCAACATAGTCATAGTGATTCTAATGATACATGAGAAAAAGTTCAAATCTTCCAAACACCCTTTATCACTAAGAATCTATTGGATAGCAAACTTTGTAATTGCTACTTTGTTTGCTGCTTCGGCTATTGTTCGATTGATAACCGTCCGTGAAGAAAAGTTGGAGCTTAGTTTGAGAATAGATGACATATTCTCTTTGGTTAATCTTCCATTATCTATTTTCTTTTTCGTGATATCTATAAAAGGGTCATCAGGGATTCATGTGATAAGAATATCTGATGTAGTAGTAGCAACATATCGGTCATTTTCGACCGATAGAAATTTGAGTCCTTATGCCTGTTCTTCATTTTTGTCCAAAACAGGGTGGTTTTGGATGAATCCTTTACTCAATAAAGGTTACAAAACACCCCTTAAACTAGAAGATGTACCTTCACTTCCTCTTGATTTTAGAGCAGAAAAAATGTCAGAACTTTTTCAAACCAATTGGCCAAAACCAGAGGAAAACAGTAAGCATCCAGTTGGAGTTACCCTTTTTAGGTGTTTTTGGAAACACATAGTTTTCACGGGCTTCCTTGCAATCATTAGGCTTTGTGTGATGTATGTTGGTCCATTGTTGATTCAAAGTTTTGTTGATTTCACATCAAGGAAAGATAGTACGACTAGTGAAGGTATTGCTTTGATATGTATCCTTTTTGCAGCAAAATCAGTTGAGGTACTTAGTGTTCATCAATTCAACTTCCACTCTCAAAAACTCGGTATGCTTATCCGTTCGAGCATAATCACTTCAGTTTACAAAAAGGGTTTAAGGTTGTCAAGTTCTTCAAGACAAGCTCATGGAACTGGACAGATTGTGAATCACATGGCTGTTGATGCTCAGCAACTCTCAGATTCGATGATGCAGTTTCATCCTATATGGTTGATGCCATTGCAAGTTTCTGTTGCATTGGTTCTTTTGTATAGCTATGTTGGTGTATCTGTCGTTGCATCAATTCTTGGTATTGCCATTGTCTCTTTCTTTACTCTATATCGAACAAAGAGTAGTAATAGTTTTCAGTTTCAGATAATGAGGAGCCGTGATTCGAGGTTGAAGGCGACAAATGAGTTGCTTAACAACATGCGTGTGATTAAATTTCAAGCGTGGGAAGAGTACTTCGGTAACAAGATTCAACAGTTTCGTGAAGCCGAACATGGATGGATTGCAAAATTCTTGTACTATTTTGCAGTTAACATGGGAATTCTGGGTAATGCTTCAATAACTGTAGCTGTTCTTACCTTTGGAACTGCAACTTTTATAGGAACTCCTTTGAATGCCGGCACAGTTTTTACAATAACTTCAATTATCAAGATTCTTCAAGAGCCTCTGAGGACTTTCCCTGAGGCTCTTATCAATATTTCTCAAGCAACTATATCTTTAGGGAGATTGGATGAGTTCATGATGAGTAAGGAAATGGATGATAGTGCTGTGCAAAGAGATGAGAGTTGTGTTGGTGATGTAGCTGTGGAGATAAAAGATGGGAAATTTTCATGGGATGATAAGGATGAGAATGAGGCTTTGAGAGTTGAAGATTTGGTGATTAGGAAAGGGGATCATGCTGCTGTTGTAGGAACTGTTGGTTCAGGCAAGTCTTCATTATTGGCTTCTGTGTTAGGGGAAATGTTCAAGATCTCAGGAAAGGCTAGAGTTTGTGGGACGACGGCATATGTAGCACAGACATCATGGATTCAGAATGCAACCATCAAAGAAAACATATTGTTTGGCTTACCAATGAACATGGAAAAGTACAAGGAAGCTTTAAGAGTGTGCTGCCTTGAAAAGGATCTTGAAATGATGGAAGATGGTGACGAAACTGAGATTGGAGAGCGTGGTATTAACCTCAGCGGAGGCCAGAAACAACGCATACAACTTGCTAGAGCTGTATATCAAGACAGTGACATCTATCTCCTTGATGATGTATTCAGTGCTGTTGATGCTCAAACAGGATCATTTATTTTTAAGGAATGTATCATGGGAACTCTTAAAGATAAAACTGTTTTACTTGTAACACATCAAGTTGATTTCTTGCATAATGTCGACTCTATAATGGTGATGCGTGAAGGGAGAGTAGTACAAAGTGGAAAGTATGATGAACTTCTCAAAGCAGGCCTAGATTTTGGTGCACTTGTAGCTGCTCATGAATCCTCAATGGAAATTGCAAAAACAAGTGATGATTATGCTCAATCTCCAAAACTGTCCCACATCGCTTCGAAAGAAAAAGAAAGCGCAGTAGAAAAGCAGTCTTCTCAAGACCAACCTAAGTCCGATAAAACTGCAGCAAAGCTCATTGAAGACGAGGAAAGAGAAACTGGAGGTGTAAACCTTACAGTATACAAACATTATTTCACAGAAGCGTTTGGATGGTGGGGCATAGCACTAATGGTAGCAGTGTCAGTGGTTTGTATGCTGTCAACTTTGGTTGGCGATTATTGGCTAGCAACTGCAACTGCAGATGATTCTGGCATTCCTTCTTCCACTTTCATTACTGTCTATGCTGTTATAGCTGTTGTTGTATGCATAGTTGTTATGTTGAGAGCTCTCTTGTATACTTATTGGGGTTTAAAGACATCTCAAAGCTTCTTCATTGGAATGCTTCAAAGTATCCTTCATGCACCAATGTCATTCTTTGATACTACTCCTTCTGGCAGAATTTTGAGTCGTGTATCTACTGATATACTTTGGGTGGATATACAAATTCCGATGTTTGTAAACTTTTTAACAACGACATACTTAGGATTACTCAGTATCCTCATAGTCACGTGCCAGAATTCTTGGGAGACTGTCTTCCTCTTAATTCCACTGTTTTGGCTCAACAACTGGTATAGGAAATATTATCTTGCAACTACTAGGGAATTGACTCGACTTGATTCAATCACAAAAGCTCCTGTGATTCATCACTTTTCAGAGACCATTTCTGGTGTCATGACAATTCGTAGCTTAAGAAAGCAGAATGCATTTTCTCAGGGAAATGTTGACAGGGTGAATGCAAGTCTAAGAATGGACTTTCATAACAATGGTGCAAATGAATGGCTTGGTTTTCGTTTGGACTATATGGGAGTTGTTTTCCTTTGCATTTCCACCCTTTTTATGATCTTTTTGCCAAGTGCTATTGTTAGGCCAGCAACGGTTGCTGCTGCGGTCCTTTTGTTGTGA 3606 0.3866 MSSSSWLTSPSCTLLPVDSSSSTPELIIQWLRFILLSPCPQRLLLSALDSLFLLFLLAFAAHKLYSRFNSRANTSSSITKPLLQEKDSDYRITFWFKLAFLVTTLLAITYTVLGILAFTQTNNLSSWKQIEALFRLFQAITNIVIVILMIHEKKFKSSKHPLSLRIYWIANFVIATLFAASAIVRLITVREEKLELSLRIDDIFSLVNLPLSIFFFVISIKGSSGIHVIRISDVVVATYRSFSTDRNLSPYACSSFLSKTGWFWMNPLLNKGYKTPLKLEDVPSLPLDFRAEKMSELFQTNWPKPEENSKHPVGVTLFRCFWKHIVFTGFLAIIRLCVMYVGPLLIQSFVDFTSRKDSTTSEGIALICILFAAKSVEVLSVHQFNFHSQKLGMLIRSSIITSVYKKGLRLSSSSRQAHGTGQIVNHMAVDAQQLSDSMMQFHPIWLMPLQVSVALVLLYSYVGVSVVASILGIAIVSFFTLYRTKSSNSFQFQIMRSRDSRLKATNELLNNMRVIKFQAWEEYFGNKIQQFREAEHGWIAKFLYYFAVNMGILGNASITVAVLTFGTATFIGTPLNAGTVFTITSIIKILQEPLRTFPEALINISQATISLGRLDEFMMSKEMDDSAVQRDESCVGDVAVEIKDGKFSWDDKDENEALRVEDLVIRKGDHAAVVGTVGSGKSSLLASVLGEMFKISGKARVCGTTAYVAQTSWIQNATIKENILFGLPMNMEKYKEALRVCCLEKDLEMMEDGDETEIGERGINLSGGQKQRIQLARAVYQDSDIYLLDDVFSAVDAQTGSFIFKECIMGTLKDKTVLLVTHQVDFLHNVDSIMVMREGRVVQSGKYDELLKAGLDFGALVAAHESSMEIAKTSDDYAQSPKLSHIASKEKESAVEKQSSQDQPKSDKTAAKLIEDEERETGGVNLTVYKHYFTEAFGWWGIALMVAVSVVCMLSTLVGDYWLATATADDSGIPSSTFITVYAVIAVVVCIVVMLRALLYTYWGLKTSQSFFIGMLQSILHAPMSFFDTTPSGRILSRVSTDILWVDIQIPMFVNFLTTTYLGLLSILIVTCQNSWETVFLLIPLFWLNNWYRKYYLATTRELTRLDSITKAPVIHHFSETISGVMTIRSLRKQNAFSQGNVDRVNASLRMDFHNNGANEWLGFRLDYMGVVFLCISTLFMIFLPSAIVRPATVAAAVLLL 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01483 1201 Pfam ABC transporter transmembrane region 942 1182 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g01483 1201 Pfam ABC transporter transmembrane region 327 594 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g01483 1201 FunFam ABC transporter C family member 5 626 872 - -
Mepo6g01483 1201 FunFam ABC transporter C family member 5 905 1200 - -
Mepo6g01483 1201 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 640 863 IPR003439 GO:0005524
Mepo6g01483 1201 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 253 1195 - -
Mepo6g01483 1201 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 939 1201 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g01483 1201 ProSitePatterns ABC transporters family signature. 765 779 IPR017871 GO:0005524|GO:0016887
Mepo6g01483 1201 SUPERFAMILY ABC transporter transmembrane region 930 1184 IPR036640 GO:0005524|GO:0016020
Mepo6g01483 1201 SUPERFAMILY ABC transporter transmembrane region 317 618 IPR036640 GO:0005524|GO:0016020
Mepo6g01483 1201 SMART AAA_5 667 848 IPR003593 GO:0016887
Mepo6g01483 1201 CDD ABC_6TM_ABCC_D2 938 1188 IPR044726 GO:0140359
Mepo6g01483 1201 FunFam ABC transporter C family member 10 309 622 - -
Mepo6g01483 1201 Gene3D ABC transporter type 1, transmembrane domain 905 1201 IPR036640 GO:0005524|GO:0016020
Mepo6g01483 1201 Gene3D - 634 866 IPR027417 -
Mepo6g01483 1201 CDD ABCC_MRP_domain1 640 840 - -
Mepo6g01483 1201 CDD ABC_6TM_ABCC_D1 327 614 IPR044746 GO:0140359
Mepo6g01483 1201 Pfam ABC transporter 663 791 IPR003439 GO:0005524
Mepo6g01483 1201 Gene3D ABC transporter type 1, transmembrane domain 315 622 IPR036640 GO:0005524|GO:0016020
Mepo6g01483 1201 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 326 606 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo6g01483 1201 MobiDBLite consensus disorder prediction 889 909 - -
Mepo6g01483 1201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 637 859 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01483 Mepo-Chr6 16139824 16201925 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01483 640 884 Calmodulin-binding Proteins AT2G36910 30.566 4.19e-27 118