Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo6g01457 ATGGGAGGAAATGACAATAATGGTGGCCAAGGCCAAGGGAAAAAGTATGCACTTCTTGGTGTATCTTGCATACTTCTTGTGGCTATGGTAGGCGCCGTCGCAGTTAGTTTAACAAAGGGTGACGATGGAGAACAAAAAGCAGAAATCTCTAACTCACAAAAAAATGTTGATATGCTATGTCAATCAACAGAATACAAAGAAACATGTCACAAAAGTCTTGAAAACGCGTCATCAACCGACACGAAAGAGCTTATCAAAGCAGCTTTGAGTGCAACGTCAGAGGAATTGCGGAAACACATAAACAATTCAACTCTTTATCAAGAATTGGCAAAAGACAGCATGACAAAACAAGCAATGGAAATTTGCAATGAAGTGTTGGATTATGCCGTTGATGGAATTCATAAATCTGTTGGTACATTGGACCAATTTGATTTCCATAAGTTAAGTGAATATGCTTTTGATCTCAAAGTTTGGTTAACTGGTACACTTTCTCATCAACAAACATGTTTAGATGGTTTTGCAAATACAACAACAAAAGCTGGTGAAAAAATGACTAAGGTTTTGAAAACCTCTATGGAATTAAGTAGTAATGCCATTGACATGATGGATGCTGTTTCGATCTTACTTAAGGGTTTCGATACAACCCAATATAGTGTTAGTAGGAGGCTTTTATCTGATGATGGTATTCCTTCATGGGTTAGTGACGGGCACAGACGTCTTCTTGCTGGTGGAAATGTTCAAGCAAATGCTGTTGTGGCTCAAGATGGGAGTGGACAGTTTAAGACATTAACTGATGCTCTTAAGACTGTTCCTCCTACAAATGCAGTACCTTTTGTGATCCATGTTAAGGCTGGTGTTTATAAAGAGACTGTTAATGTTGCTAAGGAAATGAATTATGTTACTGTCATTGGTGATGGTCCTACAAAGACCATATTCACTGGTAGCCTCAACTATGCCGATGGTGTCAACACTTACAATACTGCAACGTTCGGTGTTAATGGTGCAAACTTCATGGCAAAGGATATCGGCTTCGAGAACACAGCAGGAACGAATAAACACCAAGCAGTTGCCCTCCGAGTAACAGCAGATCAAGCAATATTCCACAACTGTCAAATGGACGGTTTCCAAGACACACTCTACGTCCAATCCCAACGCCAATTCTACCGTGACTGCATCATCTCTGGCACAATCGACTTTGTTTTTGGCGACGCCTTCGGAGTTTTCCAAAATTGCAAACTAGTTTGTAGAGTACCAGCAAAAGGCCAACAATGTCTAGTAACCGCAGGTGGAAGAGAAAAACAAAACAGCGCAAGTGCTCTCGTTTTCCAAAGTTCTCACTTCACAGGTGAACCAGCGCTAACATCGGTAACACCGAAAGTATCTTACCTAGGAAGACCATGGAAGCAATATTCCAAAGTTGTCATAATGGACTCAACCATTGATGCTATTTTTGTACCTGAAGGTTACATGCCATGGATGGGAAGTGCTTTTAAGGAAACATGTACTTATTATGAGTACAATAATAAAGGTCCTGGTGCTGACACAAATTTAAGAGTTAAATGGTATGGTGTTAAGGTTTTAACTTCAAATGTAGCAGCTGAATATTACCCTGGTAAATTCTTCGAGATTGTTAATGCAACTGCACGTGATACTTGGATTGTGAAGTCTGGTGTTCCTTATTCACTTGGACCTATGTAA 1698 0.3999 MGGNDNNGGQGQGKKYALLGVSCILLVAMVGAVAVSLTKGDDGEQKAEISNSQKNVDMLCQSTEYKETCHKSLENASSTDTKELIKAALSATSEELRKHINNSTLYQELAKDSMTKQAMEICNEVLDYAVDGIHKSVGTLDQFDFHKLSEYAFDLKVWLTGTLSHQQTCLDGFANTTTKAGEKMTKVLKTSMELSSNAIDMMDAVSILLKGFDTTQYSVSRRLLSDDGIPSWVSDGHRRLLAGGNVQANAVVAQDGSGQFKTLTDALKTVPPTNAVPFVIHVKAGVYKETVNVAKEMNYVTVIGDGPTKTIFTGSLNYADGVNTYNTATFGVNGANFMAKDIGFENTAGTNKHQAVALRVTADQAIFHNCQMDGFQDTLYVQSQRQFYRDCIISGTIDFVFGDAFGVFQNCKLVCRVPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKVSYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPWMGSAFKETCTYYEYNNKGPGADTNLRVKWYGVKVLTSNVAAEYYPGKFFEIVNATARDTWIVKSGVPYSLGPM 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo6g01457 565 FunFam Pectinesterase 52 206 - -
Mepo6g01457 565 SUPERFAMILY Pectin lyase-like 246 561 IPR011050 -
Mepo6g01457 565 NCBIfam pectinesterase inhibitor domain 38 200 IPR006501 GO:0004857
Mepo6g01457 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 204 IPR035513 -
Mepo6g01457 565 Pfam Pectinesterase 249 540 IPR000070 GO:0030599|GO:0042545
Mepo6g01457 565 Gene3D - 246 564 IPR012334 -
Mepo6g01457 565 ProSitePatterns Pectinesterase signature 1. 274 293 IPR018040 -
Mepo6g01457 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 205 IPR035513 -
Mepo6g01457 565 ProSitePatterns Pectinesterase signature 2. 393 402 IPR033131 -
Mepo6g01457 565 PANTHER PECTINESTERASE 23 553 - -
Mepo6g01457 565 FunFam Pectinesterase 4 246 564 - -
Mepo6g01457 565 Pfam Plant invertase/pectin methylesterase inhibitor 56 201 IPR006501 GO:0004857
Mepo6g01457 565 CDD PMEI-like_3 59 206 - -
Mepo6g01457 565 SMART PMEI_2 51 201 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo6g01457 Mepo-Chr6 15878388 15880677 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo6g01457 9 560 Carbohydrate Esterase AT5G49180 46.127 1.86e-175 506